Snodgrassella alvi: SALWKB2_0819
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Entry
SALWKB2_0819 CDS
T03063
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
salv
Snodgrassella alvi
Pathway
salv03030
DNA replication
salv03430
Mismatch repair
salv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALWKB2_0819
03430 Mismatch repair
SALWKB2_0819
03440 Homologous recombination
SALWKB2_0819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salv03032
]
SALWKB2_0819
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_0819
Enzymes [BR:
salv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALWKB2_0819
DNA replication proteins [BR:
salv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SALWKB2_0819
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SALWKB2_0819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_18
AAA_16
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_30
ResIII
AAA_24
nSTAND3
AAA_19
Rad17
AAA_7
VapE-like_dom
Mg_chelatase
SKI
AAA_17
TsaE
AAA_28
DEAD
ABC_tran
AAA_assoc_2
NTPase_1
DUF3646
AAA_2
Herpes_Helicase
TniB
PIF1
APS_kinase
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHN28201
UniProt:
X2HF69
LinkDB
All DBs
Position
894266..896230
Genome browser
AA seq
654 aa
AA seq
DB search
MVMTYQVLARKWRPKKFADLVGQEHVVRALLNALDKGRLHHAYMLTGTRGVGKTTIARIL
AKSLNCQHTEHGEPCNQCDSCRQIDAGRFVDVLEIDAASNTGIDNIREVLENAQYAPTMG
QYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPQKVPITVLSRCLQFVLRNL
NSTQVHDHLVYVLQQEQIAYEDPALWLLGRAAAGSMRDALSLLDQAIAIGSGKVTESDVR
NMIGAVDKSYLYALLEALAVRDGQALLAKAEEMASCAVGFDSALTELALLLQRLTILQSV
PSVGADDPGYAALTRFAGLFSGEQIQLYYQCVLRGKADLPLAPDEKAGFVMTLLRMLAFA
PLAALNAQRLHGQIDGTQLHNVSVNNKQMDNIPTVSEENSPVSVSEALSETASDATTEVP
VTLETEIIEKKSSSITVADSKILNDSSPALQESQSVTISDEPPPPWETGVDDISCRAVSV
FESIESVNANAVEKYDENTDISAEKPRDDQNLSLVKKAFPPLTAENWPEILTMLAHRLGA
VQLFSQHTAIVAYDENSGDLTIALAEQGEPTANRELLNRLAESLSEVYQRPIHLHTCSWQ
EQSMPETPQMRQQRLHAEQQQQAKTVLEAQPAVKMLMETFNAEWIPESLHLDKE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggttatgacttatcaagtattggcacgaaaatggcgaccaaaaaagtttgccgattta
gtaggacaggagcatgtagtcagggcgttgttaaatgcgcttgataaaggacgtttgcat
catgcttatatgcttacggggactcggggtgtaggtaaaaccaccattgcccgtattctg
gccaaaagcctgaattgccagcatactgaacatggtgagccatgtaaccaatgtgattct
tgtcgccagattgatgccggccgttttgttgatgtgctggaaattgatgctgcttccaat
acaggaattgataatatccgcgaagtactcgaaaacgcacaatatgcgccaacgatgggg
cagtataaagtctatatcatcgacgaagtgcacatgttgtcgaaaagtgcttttaatgcc
atgctcaaaactttagaagagccgcctgaacatgtgaaatttattctggcgacgacagat
ccgcagaaagtaccgattacggttttaagccggtgtctgcaatttgtcttgcgcaatctg
aatagtactcaggtacatgatcatctggtttatgtattacagcaggaacaaattgcttat
gaagatccggcattatggctgttaggccgggctgctgccggctcaatgcgtgatgcactc
agtttgcttgatcaggctattgccattggttcaggaaaggtgactgaatctgatgtgcgg
aatatgattggtgcggttgataaaagttatttgtatgcgcttttggaagccttggctgta
cgggatggtcaggcattactggctaaagcggaggaaatggccagttgcgcggtaggattt
gatagtgcgttaactgagctggctctgttattacagcgtttaacaatactgcaatctgtt
ccgtcagtcggcgctgatgatcctgggtatgcggctttaacccgttttgcgggtttgttt
tcaggagagcagattcaattatattatcagtgtgtattacgaggtaaggcagatttgccg
cttgctccggatgagaaagccgggtttgtcatgaccttattgcggatgcttgcatttgca
cctctggctgcactgaatgcacaacgtttgcatggacaaatcgacggtacacagttgcat
aatgtgtcagtaaataataagcagatggataatataccaactgtttctgaagaaaatagt
ccagtttcagtatctgaagcactgtcagagacagcatctgatgcaactactgaagtaccg
gtaacattagaaactgaaataatcgaaaaaaaatcttcgtcgataacagttgctgatagc
aagatattaaatgattcttcacctgctttgcaggaatctcagtctgtaacgattagcgat
gagcctccgccaccctgggaaacaggtgttgatgacatatcctgcagggctgtgagtgtg
tttgagtctatagaatcagtcaatgcaaatgcggtagaaaagtatgatgaaaatacggat
atatccgcagaaaagcccagagatgatcagaatttatctctggtaaaaaaggcttttccg
ccattgacggcagagaactggccggaaattttaactatgctggcacatcgtctcggtgca
gtacagttgttcagtcagcatacggcgattgttgcttatgatgaaaatagtggtgattta
actattgctctggctgagcagggtgagccgacagccaatcgtgagttactaaaccggctg
gctgaatcgttgtcagaagtttatcaacggccgatacatctgcatacctgtagctggcag
gaacagagtatgccggaaacaccgcaaatgcgtcagcagcgattacatgcagaacaacag
cagcaggcaaagacagtgttagaagcccagcccgctgtaaaaatgctgatggaaactttt
aatgcagaatggataccggaaagtttacatctggataaagaataa
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