Salinivibrio sp. YCSC6: E8E00_00245
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Entry
E8E00_00245 CDS
T05946
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly00300
Lysine biosynthesis
saly00470
D-Amino acid metabolism
saly01100
Metabolic pathways
saly01110
Biosynthesis of secondary metabolites
saly01120
Microbial metabolism in diverse environments
saly01230
Biosynthesis of amino acids
Module
saly_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E8E00_00245 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E8E00_00245 (lysA)
Enzymes [BR:
saly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E8E00_00245 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCF34741
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Position
I:55070..56323
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAESLPLTQLADDHGTPLYVYSRATFERHWHAFDRAVGDHPHLVCYAV
KANSNIGVLNVLARLGSGFDIVSQGELERVLVAGGDPAKVVFSGVGKTAAEMRRALEVGI
KCFNVESHSELDRLNQVAGELGVQAPISLRINPDVDANTHPYISTGLKENKFGIAFAEAL
NSFRYAASLPHLKVEGIDCHIGSQLTELAPFIESTDRLLALIDTLGDEGITIRHLDVGGG
LGVTYSDEKPPQPSEYAKALLARLDNHRHLELIFEPGRAIAANAGVLLTKVEFLKHSEHK
NFAIIDAGMNDLIRPSLYQAYQEIIPVVPRQGEPQTYDLVGPVCETGDYLGKDRSLVLEA
GDLLAVRSAGAYGFVMASNYNSRCRPAEVMVDGDQAHLVRERENLASLWQLEQRLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttcaattatcaggacgacggccagctgtgggccgaatcattgcctttgacc
cagcttgccgatgatcacggcacacccttgtacgtctattcacgtgcaacttttgagcgc
cattggcacgcgtttgatcgtgccgtgggcgatcatccgcatttggtgtgctatgccgtc
aaggcaaactccaatatcggtgtgttaaatgtgctggcacgcttggggtcaggatttgat
attgtctctcaaggtgaactcgagcgcgtgctcgtcgccggtggtgatcctgcgaaagtg
gtgttttctggcgtggggaaaacggccgcagaaatgcgtcgtgcactggaagtgggcatc
aaatgtttcaatgtggagtcccactctgaactcgaccgcttaaatcaagtcgcgggcgag
ttgggtgtgcaagcgccgatatcgttgcgtattaatcctgatgtggatgccaacacccac
ccctacatctcgacgggcttaaaggaaaataagtttggcattgcctttgctgaggcgttg
aatagtttccgttatgcagccagcttgccacaccttaaggtcgaaggcattgactgtcat
atcggttcgcaactgaccgaactcgcgccttttattgaatctaccgaccgcttgttggcg
ctgattgataccttgggtgatgaaggcattacgattcgtcatctggatgtgggtggcgga
ttaggcgtgacctatagcgacgagaaaccgcctcagccatctgagtatgccaaagcgttg
ttggcgcgtttggacaatcatcgtcatcttgagctgatttttgagccgggtcgtgcgatt
gccgccaatgcgggggtgttgctgaccaaggttgagtttctcaagcacagtgagcataaa
aactttgccattatcgatgcggggatgaacgatttaattcgtccgtcactgtatcaagcc
tatcaagaaatcattcccgtggtgccgcgccaaggagagccacaaacctatgatttagta
ggaccagtttgcgaaacgggtgattacttgggcaaagaccgctcgctggtgttagaagcg
ggtgatttactggcggtacgctcagccggcgcatatggctttgtgatggcgtcaaactat
aactcacgctgccgccccgccgaggtcatggttgatggcgaccaagctcaccttgtgcgc
gagcgcgaaaatttggcgtcgctatggcagcttgaacagcgcctaccagaataa
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