Salinivibrio sp. YCSC6: E8E00_06120
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Entry
E8E00_06120 CDS
T05946
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E8E00_06120 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saly02000
]
E8E00_06120 (msbA)
Enzymes [BR:
saly01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
E8E00_06120 (msbA)
Transporters [BR:
saly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E8E00_06120 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
AAA_30
Herpes_UL43
nSTAND3
SLFN-g3_helicase
DEAD
AAA_24
AAA_29
DUF5906
APS_kinase
AAA_18
MMR_HSR1
AAA_25
ABC_membrane_2
DUF87
Zeta_toxin
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QCF35773
LinkDB
All DBs
Position
I:1328428..1330182
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AA seq
584 aa
AA seq
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MSEYQDKTTWQTFKQLWPYIANYKLGLIVAIVALVINAASDTLMLSMLKPLLDQGFTYDD
VAGDFLKWMPVYLVVLMVVRGLSSFVSAYCLSWVSGNVVMTMRRRMFNHFMKMPVSFFDQ
ESSGALLSRITYDSEQVASATSSALVSLVREGASILGLMILMFWSSWQLSAILLVIAPVV
AFSIRVVSKRFRRISSNMQDAMGSVTSSAEQMLKGHKVVLSYGGQDVEKARFDKVSNRMR
QQTMKLVSAQAIANPVIQLIASMALVVVLVLANTEAIRSELTAGTFAVVFGAMFGLMRPL
KSLTNVTSQFQRGMAACHSLFNLMELDTEKDTGEHEADRVKGDIQVDNVVFTYPSKEAPA
LRNVSFELPAGQTLALVGRSGSGKSTIANLLTRFYDIDSGTITLDGVPIDEYKLANLRQH
VAVVSQNVHLFNDTVANNIAYAAEDQFTREQIIEAAKLAYADDFIRELDEGYDTIIGENG
VSLSGGQRQRIAIARALLRNAPVLILDEATSALDTESERAIQAALDELQKNRTVLVIAHR
LSTIEDADQILVVDEGEIVERGNHQALLEQDGAYAQLHRIQFGD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatatcaagataaaacgacctggcagacgtttaagcaactctggccatacatc
gccaactataagcttggcttgatcgttgctattgtcgcactggttatcaatgctgccagt
gataccctcatgctctccatgctcaagccactcctcgatcaaggttttacctatgatgac
gtggcgggggatttcctcaaatggatgcccgtttatctcgtggtattgatggtagttcgc
gggctgtctagttttgtctccgcttactgcttgtcatgggtatcagggaatgtggtgatg
accatgcgccgacgcatgtttaaccactttatgaaaatgcccgtcagttttttcgatcaa
gaatcctccggcgccttgctctctcgtatcacgtatgattccgaacaggttgcatcggcg
acaagcagtgccttagtgagcctagttcgtgagggagcgtcaattctcggtttgatgata
ctgatgttttggtcgagctggcagctatctgcgattttgttggttatcgcgcctgtggtg
gcgttttcgattcgcgtggtgtcgaaacggttccgtcgtatctcatcaaatatgcaagat
gccatggggtctgtcactagctcggcagaacaaatgctgaaaggacataaagttgtcctg
agctacggtggccaagacgttgaaaaagcgcgctttgataaagtcagtaatcgcatgcgc
caacaaacgatgaaactggtctctgctcaagccattgccaacccagtgatccagctgatt
gcctcgatggcgctggtcgtggtcttggtactggcgaatactgaagcgattcgctccgag
ctaactgccggtacgtttgcagtggtgttcggtgcgatgtttggtttgatgcgtccacta
aaatccctcactaacgtcacgtcgcagttccaacgaggcatggcagcgtgtcacagtctg
ttcaacttgatggaactcgacaccgaaaaagataccggtgagcatgaagcggatcgcgtg
aagggcgatattcaggtggacaatgtcgtctttacgtatccatccaaagaagcgcctgcg
cttcgcaatgtcagctttgaattacctgcagggcaaaccttggcgctggtgggacgttcc
ggctcaggcaaaagtaccattgccaatctgttaacgcgtttttatgacattgatagtggc
accatcacattggatggcgtgcccattgatgaatataagctcgccaatctgcgccaacat
gtggcggtggtctcgcaaaatgtccatctgtttaacgacacagtcgccaacaacatcgcc
tacgcagccgaggatcagttcacccgtgagcagatcattgaggcggcaaaattagcgtat
gcagacgacttcattcgtgaattggatgaagggtatgacaccattattggtgagaatggc
gtcagcttatcaggcggtcagcgtcaacgcattgccattgctcgtgcgctgctgcgcaac
gcaccagtactgattttggatgaagcgacgtcggcattggatactgaatctgagcgtgcc
attcaagcggcattggacgagttgcaaaaaaaccgcactgtgttggtgattgcgcaccgt
ttgtccacgattgaggatgcggatcaaattctcgttgtggatgaaggtgaaattgttgag
cgtggtaaccatcaggcgctgttagagcaagacggtgcgtatgcccagttgcaccgtatt
caatttggtgactga
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