Sphingobium amiense: SAMIE_1019940
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Entry
SAMIE_1019940 CDS
T06684
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sami
Sphingobium amiense
Pathway
sami00470
D-Amino acid metabolism
sami00550
Peptidoglycan biosynthesis
sami01100
Metabolic pathways
sami01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMIE_1019940
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMIE_1019940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMIE_1019940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
SAMIE_1019940
Enzymes [BR:
sami01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SAMIE_1019940
Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
Precursor biosynthesis
Amino acid ligase
SAMIE_1019940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBD98493
UniProt:
A0A494W1G1
LinkDB
All DBs
Position
complement(2334212..2335177)
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AA seq
321 aa
AA seq
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MTRGPWHVAVLMGGWSAERPVSLSSGEGVAKALEQRGHRVTRIDMDRNVAQRLAEAKADV
VFNALHGVPGEDGTIQGLMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGNIV
ESESLFDGDPLPRPYVLKPVNEGSSVGVAIVTAEGNYGNPIARDSVGPWQDFPQLLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPADIPAEIGEACKAIAL
RAHQLLGCKGASRSDFRWDDSQGVEGLFLLEVNTQPGMTPLSLVPEQAARLGIDYATLVE
MIVEEALGRAANAARAGEKHG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcggtccctggcatgtcgccgtcctgatgggcggatggtcggcggagcggccg
gtgtcgctgtcgagcggggagggcgtcgccaaggcgctggagcagcgcggccaccgcgtc
acccgcatcgacatggaccgcaacgtcgcccagcggctcgccgaagcgaaggcggacgtg
gtcttcaacgcgctgcacggcgttccgggcgaggacggcaccattcagggtctcatggac
ctgatgggtctcacctacacgcatagcggccttgccacctcggtcatcgccattgataag
caactgaccaagcaggcgctcgtcccgcacggcatcccgatgcccggcggcaatatcgtc
gaaagcgaaagcctgttcgacggcgacccgctgccgcgcccctatgtgctgaaacccgtc
aacgaaggcagctctgtcggcgtcgccatcgtgacggcggagggcaattacgggaaccca
atcgcgcgcgacagcgtggggccgtggcaggatttcccgcagcttctggccgaaccctat
attcgcggccgcgaactgacgaccgccgtgctgggcgacgaggcgctgctcgtcaccgaa
ttgcggcccaagagcggcttttacgatttcgacgccaaatataccgacggcatgaccgaa
catgtctgccccgccgacatcccggcggaaatcggggaggcgtgcaaggcgatcgcgctg
cgcgcccatcagttgcttggctgcaagggtgcgtcgcgttccgacttccgctgggacgac
agtcagggcgtcgaggggctgttcctgctggaggtcaacacccagccgggcatgacgcca
ttgagcctcgtgcccgaacaggcggccaggctgggtattgactatgcgactctagtcgag
atgattgtcgaggaggcgctgggccgcgccgccaatgcagcaagggcgggggagaaacat
ggctga
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