Streptococcus anginosus C238: SANR_0217
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Entry
SANR_0217 CDS
T02829
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sanc
Streptococcus anginosus C238
Pathway
sanc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sanc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SANR_0217 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanc03021
]
SANR_0217 (rpoB)
03400 DNA repair and recombination proteins [BR:
sanc03400
]
SANR_0217 (rpoB)
Enzymes [BR:
sanc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SANR_0217 (rpoB)
Transcription machinery [BR:
sanc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SANR_0217 (rpoB)
DNA repair and recombination proteins [BR:
sanc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SANR_0217 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
NusG_add
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AGU82712
LinkDB
All DBs
Position
202424..205990
Genome browser
AA seq
1188 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDHGLKEVFEDVLPISNFTD
TMELEFVGYEIKESKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVRNTIEKDIHKNPMDSRTDEALKE
IYERLRPGEPKTADSSRSLLVARFFDPHRYDLAAVGRYKINKKLNIKTRLLNQTIAEPLV
DPETGEILVEAGTVMTRSVIDSIAEYLDGDLNKITYIPNDAAVLTDPVVLQKFKVVAPTD
PDRVVTIIGNANPGDRVHTITPADILAEMNYFLNLAEGLGRVDDIDHLGNRRIRAVGELL
ANQVRLGLSRMERNVRERMSVQDNEVLTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRLSDLGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKVGRETGLVTNEIVWLTADEEDEFIVAQANSKLTEDGRFAEAIVMGRH
QGNNQEFPSDQVDFMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPHAP
YVGTGMEYQAAHDSGAAIIAQHDGKVVYSDAAKVEVRREDGSLDVYHITKFRRSNSGTSY
NQRTLVKVGDTVEKGDFIADGPSMEKGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKD
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDALRDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGAGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIRVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASADDLWDTVREAGMDSDAKTILYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSTVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDINGRLRAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGMDDDVIHVDDLEKAREKAAQEARAAFEAEGKE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcaatacgggaaacaccgtactcgtcgtagtttttcaagaatc
aaggaagttcttgatttaccaaatttgattgaaatccagacggattcgttcaaagatttt
cttgaccatggtttgaaagaagtatttgaagatgtacttcctatctcaaactttacagat
acaatggagctagagtttgttggttatgaaattaaagaatctaaatacactttagaagaa
gcacgtatccatgatgccagctattctgcacctatttttgtgactttccgtttgattaat
aaagaaacgggtgaaatcaagacgcaagaagtgttctttggtgattttccaatcatgaca
gaaatgggaacctttattatcaatggtggtgagcggattatcgtatctcaacttgttcgt
tcgccaggtgtttactttaatgataaagtagacaaaaatgggaaagttggttatggttcg
actgttattccgaatcgtggagcttggttagaactggaaactgattcaaaagatattgct
tacactcgaattgatcgtactcgtaagattccatttacgacgcttgttcgtgcacttggt
ttctctggtgatgatgaaatctttgacatttttggagatagcgaacttgttcgtaatacg
attgaaaaagatattcataaaaatccgatggactcacgtacagatgaagcactcaaagaa
atctatgaacgtcttcgtccaggtgagcctaaaacagctgatagctcacgtagtctattg
gtcgctcgtttctttgatccacatcgttacgacttggcggcagttggtcgttataaaatc
aataaaaaattaaacattaaaacacgtttgttaaatcaaacgattgcagaacctttggta
gatccagaaacaggtgaaatcttggttgaagctggaactgttatgacacgtagtgtcatt
gatagcattgcagaatacttggacggtgatttgaataaaattacttatattccaaatgat
gcagctgtattgacggatccagtcgttcttcaaaaattcaaagtggtggcaccaactgat
ccagatcgtgtggtaactattattggtaatgctaacccgggagatcgtgttcatacgatt
acgccagcagatattttggctgagatgaattacttcttgaacctcgctgaaggacttggt
cgtgtggatgatattgaccacttgggaaatcgtcggattcgtgccgttggtgaattgctt
gctaaccaagtacgtcttggattgtctcgtatggagcgtaatgttcgcgagcgcatgagt
gtgcaagataatgaagtgttgacaccgcaacaaatcatcaatatccgcccagtcacagca
gcgattaaagaattctttggttcatctcaattgtctcagttcatggaccaacacaaccca
ctgtctgaattgtctcacaaacgccgtttgtcagacttgggacctggtggtttgactcgt
gaccgtgctggatatgaagtgcgtgacgtgcactacacccactatggacgtatgtgtcca
attgaaacacctgaaggaccaaacattggtttgatcaataacttgtcttcttatgggcac
ttgaataaatatggctttatccaaacgccgtatcgtaaagtgggtcgtgaaacaggtctg
gtcaccaatgaaatcgtttggctgacagcggacgaagaagatgaatttatcgtagcgcaa
gcaaattctaaattaacagaagatggtcgttttgcagaagcgattgtcatgggacgtcac
caagggaacaaccaagaatttccttcagatcaagtagacttcatggatgtatcgcctaag
caggtagttgcggttgcgacagcatgtattcctttccttgaaaatgacgactcaaaccgt
gctctcatgggtgccaacatgcaacgtcaggcggtaccgttgattgatccgcatgcacca
tatgttggtactggtatggaataccaagcagctcatgactctggtgcggcgattattgcc
caacacgacggtaaagttgtctattctgatgcagccaaagttgaagttcgtcgtgaagat
ggttcacttgatgtctatcatattacgaaattccgccgttcaaactctggtacttcttac
aaccaacgtacgctggtaaaagttggcgatacagttgaaaaaggtgactttatcgcagac
ggaccttctatggaaaaaggtgaaatggcgcttggacaaaatccaatcgttgcttatatg
acatgggaaggttacaactttgaagatgccgttattatgagtgaacgtttagtgaaagat
gatgtttatacatctgttcacttggaagaatttgaatcagaaacacgtgatacaaagctc
ggacctgaagaaatcacgcgcgaaattccaaacgtcggggaagatgctttgagagacctt
gacgaaatgggaattatccgcattggtgctgaggtaaaagaaggcgacattcttgtcggt
aaagtaacgccgaaaggtgaaaaagacttgtccgcagaagaacgtctacttcatgcaatt
ttcggtgataagtctcgtgaagtacgtgatacatcccttcgagtaccacacggtggtgca
ggtgttgttcgtgatgtaaaaatctttactcgtgcgaatggtgatgaattgcagtcaggc
gtcaatatgttggtgcgtgtttatatcgcccaaaaacgaaaaatccgtgttggggacaag
atggcaggacgtcacgggaacaaaggggttgtttcccgtatcgttccagtagaggatatg
ccttatcttccagatggaacgccggttgatatcatgttgaatccacttggggtaccatcc
cgtatgaatatcggacaagttatggaacttcaccttggtatggctgctcgcaaccttggt
atccacattgcaacgccggtctttgatggagctagcgcagacgatctctgggataccgtt
cgtgaagcaggtatggatagtgatgctaagacaatcctttatgatggtcgtacgggtgag
ccctttgataatcgtgtatccgttggggtcatgtatatgattaagcttcaccacatggta
gatgataagcttcatgctcgttcagttggtccttattcaaccgttacgcaacaacctctt
ggtggtaaagcacaatttggtggacaacgttttggagagatggaagtttgggctttggaa
gcttacggtgcttctaacgtccttcaagaaatcttgacctacaagtcagatgatatcaat
ggccgtttgagagcttatgaagctattactaaaggcaaaccaattccaaaaccaggtgtc
ccagagtccttccgtgtccttgtcaaggaactacaatcgcttggtcttgacatgcgcgtc
ctagatgaagatgacaatgaagtagaacttcgtgacttggatgaaggcatggatgacgat
gtgattcacgtagatgaccttgaaaaagcgcgtgaaaaggcagctcaagaagcgagagca
gcttttgaagctgaaggaaaagaataa
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integrated database retrieval system
