Streptococcus anginosus C1051: SAIN_1276
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Entry
SAIN_1276 CDS
T02828
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sang
Streptococcus anginosus C1051
Pathway
sang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAIN_1276 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sang03019
]
SAIN_1276 (deaD)
03009 Ribosome biogenesis [BR:
sang03009
]
SAIN_1276 (deaD)
Enzymes [BR:
sang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAIN_1276 (deaD)
Messenger RNA biogenesis [BR:
sang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAIN_1276 (deaD)
Ribosome biogenesis [BR:
sang03009
]
Prokaryotic type
rRNA helicases
SAIN_1276 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGU82010
LinkDB
All DBs
Position
complement(1339513..1341210)
Genome browser
AA seq
565 aa
AA seq
DB search
MHFLHAYGVEVKNKTYLFIILCVILDRLQITMFYKVASHCLFRKKKKLKFNELHLSAELL
AEIDKAGFVEASPIQEQTIPLAMAGKDVIGQAQTGTGKTAAFGFPTLEKINTENPIVQAL
VIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALRSGAHIVVGTPGRLLDL
IKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLFSATMPDAIKQIGV
KFMKEPTHVKIAAKELTTELVDQYYIRVKENEKFDTMTRLMDVEQPELSIVFGRTKRRVD
ELTRGLKIRGFRAEGIHGDLDQGKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYN
YDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIESLTKKRMKGMKPATAEEA
FQAKKKVALKKIERDFADENIRNQFEKFGKDARKLATEFTPEELALYILTLTVQDPDTLP
EVEIAREKPLPFKYVSGANKGNRNSKNGRRSNDRRDRTNGRDNYKKSGRHDRFDKEKRYR
KDHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcttcatgcgtacggcgtggaagtaaaaaataaaacctatctttttatcatt
ctttgtgttatactagataggttgcaaataactatgttttataaggtagcttcgcactgc
ctttttagaaagaagaaaaaattgaaatttaatgaattacatttatctgctgaattgtta
gcagaaattgacaaagcgggctttgtggaagccagcccaatccaagaacaaacaatcccg
cttgctatggcaggaaaagatgtgattggacaagctcagactggtacaggaaagacagcc
gcttttggttttccgactcttgaaaaaattaacacagaaaatcctattgttcaggcttta
gtcattgcaccaactcgtgaattggctgttcaaagtcaagaggaactcttccgctttggt
cgaagcaaaggtgtgaaagtccgttctgtttatggcggatccagcattgaaaagcaaatc
aaggctctccgttcaggtgcgcacattgtcgttggaactccaggacgtttattagacctc
attaagcgcaaagcactgaaactcaatcatgtagaaacgctcattttagatgaagcggat
gaaatgctcaatatgggtttcttagaagacattgaagcaatcatctcccgcgtgccagaa
gagcgtcagacccttctcttttcagctactatgccagatgctatcaagcagattggcgtg
aagtttatgaaagagccaacacatgtcaaaattgcagcaaaagaattgacaacggagttg
gtggatcaatattatatccgtgtaaaagaaaatgaaaaatttgataccatgacacgtctc
atggatgtggaacaaccagaactttctatcgtttttgggcgtaccaaacgccgagttgat
gaattgactcgtgggcttaaaatccgtggtttccgcgcagaggggattcatggtgattta
gaccaaggaaaacgtctccgtgttcttcgcgactttaaaaacggaaatttagatgttctt
gttgcgacagacgttgctgcgcgtggtttggatatttctggtgttacacatgtttacaat
tatgacattccacaagacccagaaagttatgtacaccgtattgggcggacaggtcgtgct
ggaaaatctggtcagtccattacatttgttgcaccaaatgaaatgggttatcttcaaatc
attgaaagtttgaccaaaaaacgtatgaaaggcatgaaaccagccactgcagaagaagcc
tttcaagctaagaaaaaagttgcacttaaaaagattgagcgagattttgcggatgaaaac
attcgcaaccaatttgaaaagtttggcaaagacgctcgcaagttggcaactgaatttaca
ccggaagaattggctttatatatattgaccttaaccgtacaagatccagacactctacca
gaagtagaaatcgcgcgtgaaaagccattaccatttaagtatgtttcgggagctaataaa
ggcaatcgtaatagcaaaaatgggcgtcgtagtaatgatcgtcgtgaccgtactaatggg
cgtgacaattacaaaaagagtggtcgccacgatcgctttgacaaagaaaagcgttaccgc
aaagatcacaaaaaacctcgcaatacttcaagtgagaagaaaacaggttttgtcatccgt
aataaaggtgataagtaa
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