Sinocyclocheilus anshuiensis: 107662150
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Entry
107662150 CDS
T04917
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107662150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107662150
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107662150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107662150
NCBI-ProteinID:
XP_016307558
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTLKSASCATRGLCLRTMTELDQSCSVLREYGSEQSLLSKPDGSSTFVQGDTSILAGVYG
PAEVKVSKEIYDRATVEVLIQPKMGLPGVRERTREQCVRETCKAALLLTLHPRSSVTVIL
QVIHDDGSLLSCCLNAACMALMDAGLPMSHLFCSVTCAISKEGQIIIDPTARQEKECRAL
LTFAIESVECNVLMSSTTGSFSVQELQQCIAISQKASEQIFQFYRDSVKRRYSKIK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaagagcgcgagctgcgcgacgcgaggattgtgcctgaggaccatgacggag
ttagatcaaagttgttcagttttaagagaatatggaagtgagcagagtttgttatccaaa
cctgacggatcttccacttttgttcaaggtgatactagtatcctggctggagtttatgga
ccagctgaggttaaagtcagtaaggaaatctatgatcgagctactgtagaggttcttatc
cagcccaaaatggggcttccaggagtgcgagagcgcacgagagagcagtgtgttcgtgag
acgtgcaaggctgctcttctgctgacgcttcatcctcgttcttctgtcacagtcatcctg
caggtcatccacgatgatggctctctgctgtcgtgctgcctgaatgcggcctgtatggct
ctaatggatgccgggctgcccatgagccaccttttttgtagtgtgacctgtgctattagc
aaagaaggccagataatcattgatcccacggctcggcaggagaaggaatgtcgagcgttg
ttaacatttgctattgagagcgttgagtgcaatgttttgatgtcatcaaccacaggctct
ttttcagtccaggagctgcagcagtgcatcgcaatcagtcaaaaggcttctgaacaaatc
ttccagttttacagggattctgtcaaacggcgatattcaaagataaaataa
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