Sinocyclocheilus anshuiensis: 107684270
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Entry
107684270 CDS
T04917
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
sanh
Sinocyclocheilus anshuiensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107684270
NCBI-ProteinID:
XP_016335988
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MDKLTTTKIVKAEGGSGGSGKEIQRHTETVTTTRLSSLPPKGNSSSVSSQQVLTSTVTSS
GSGGASGGAVLVEKKIITQSSAERDASRSYVISSSSSGSSGSSSSGAGSVISGFDEISRV
TGPISSSTVKSKSSAVKSSSSVSTSITTVGGSSATGGDLSSGYGCISSSEFVSGSSGSSV
SVSGGSMNISRGRGGGAGSSAVMSAAGTSSSMTVTKFSSSSPSGTRKGLSYSTVPTERKT
SLSLHTGGYEGSSSGNSSPEYIKKEYVSTSVATRGRTQTRESEIRARLQSASPSTRWTEL
DDVKRLLKGSRSGSISPPRSPTNTLPIPKKASVDTRHESQSGYDGTVLDAGFSGYYTSPN
NLSYTTLQQPSSPIGGMQNNLTLSSSAFSSAAYGMHNNLSTSGGALMVNGISAGQVYGAQ
NNVGSAGLATTVTTIPSSPITADDVFVKDGKFIAIGKENVAAKKESERLVMSKNTGKLFI
TSTTSAGADSEDSLKREKKMISSTTESTMTASRASTKDKSTYAAIRKDESDDAGLGFCSC
CSWWKWLLALILGLLLLLGLLCGLITLGEEVRKLKARVDAIDGGESTVSARTSRFSASSA
VNIIDPLESSYTERIPGVRADNTINLGSASAAQDPVVLQRAIQQILRSELQSDTIRASLA
TSLKGERGEPGPKGDQGPPGVKGDAGFPGIPGPPGLIGHPGQEGPRGPKGSAGESGNDGL
PGPRGREGPAGHRGEPGPPGIGEKGEKGSSGDVGAPGLAGPPGPVGPKGDAGARGVPGLP
GAPGPQGFRGDSGDPGPKGDKGPAGPPGVKGDQGERGPRGATGEPGQVGPAGPPGEKGLK
GSAGAPGPDGVKGIRGDQGPIGLPGARGPSGPPGDAGIPGAPGLQGPPGLPGTPGQPGAK
GEPGEPGRVISAGANTNTVRVPGPPGPHGAPGPAGPSGLSGPIGPAGLPGPPGSKGDKGD
KGEDGKPGVSESAGKKAPSEPGPPGPPGPPGPPGNDGQPGIGQPGPPGEKGKPGSFVPTS
ETFFAGPPGPPGPIGPKGSQGDIGPQGFPGQPGLPGEPGIGIPRQPGTPGPRGEQGPEGP
PGPQGPQGPMGPIGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGSPGPPGPPGPPGAPGS
SGGGSPDVVQQISDYLRSEPIREYLTGPPGPPGPPGPTGSGSEDLLANRVIEYLQRDEVR
QYLIGPPGPPGPPGVPGGYGFNTQEVAGRVLRLLNDAGFTGLPGPAGPPGPQGPPGGSGG
LLSYAVNENQPQIHAEPQEYIKRHPSSDENLDYAVIAKKVSDYIKSHGLLQGQDGVIGIP
GSRGPPGLPGPPGPIGFSGPPGRPGPPGISPELPYSNMTAIIDYIRDHRMIGPPGITGQK
GEPGYSGPVGPKGDRGFTGPPGTPGFPGMKGEKGEKGEASYVTRRRRRRSSHLEECI
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctaaccacaaccaagattgtgaaagcagaggggggatctggaggatctgga
aaagaaatccaaagacacacagaaactgtaacaaccacaagactgtcatctctacctcca
aaaggcaacagcagctccgtgagcagccaacaggtactgacctccactgtgaccagctca
ggctctggaggagcttcaggaggagctgttctggtggagaagaagatcatcacccagagc
agtgctgaaagagacgcttccagaagttatgtcatatcctcctcctcgtctggaagttca
ggcagcagcagttcaggagcaggatctgtgataagtggatttgatgaaatatctcgcgta
accggaccgattagtagctctacagttaaaagcaaaagctctgcagttaaaagctctagc
agtgtctctacctccatcacaacagtaggtggttcctcagcaacaggtggagatctttcc
tctggatacgggtgcatctcctcctctgagtttgtgtctggttcttcaggcagttctgtt
agtgtttctggaggcagtatgaacatatccagaggtagaggaggtggcgctggctcctct
gcagtcatgtctgccgcaggaacctccagctccatgactgtgaccaagttcagctcctcg
tcgcctagtggcacaaggaaaggtttgagttacagcacagttcctacagagaggaagacc
agtctgagccttcacactggaggatatgaggggagctccagtggcaattcttcccctgaa
tacataaagaaagaatatgtttcgacaagtgttgccactagaggacgcactcaaacacga
gagagtgagatcagagccagattgcagagtgcctctccctccactagatggacagagctg
gatgatgtgaagagattactgaagggaagtcgctccgggagcatcagtccacctcgctct
cccaccaacactctacctatcccgaaaaaagccagtgtggacacccgtcatgagagccag
tcaggttatgacggcacagtcctggatgctggattcagcggatattacaccagcccaaac
aatctcagttacaccacactgcaacaaccatcatcacccataggtggcatgcagaataat
ctgaccctcagctcatctgccttcagtagtgcagcatatgggatgcataataacctgtca
acatctggtggtgcactcatggttaatggaatcagtgctggccaagtgtatggggcacag
aataacgttggcagcgctggattggccaccactgttactactattcccagcagccctatc
accgctgatgacgtgtttgtgaaagatggcaagtttattgcgattggaaaagaaaatgta
gcagctaagaaagagagtgagagactggtcatgtccaaaaacactggcaaactgttcatc
acttccaccaccagtgctggagcagattctgaagattcgctcaagagggagaaaaagatg
atctccagcactacagaatccacaatgactgcttccagagcctcaacaaaagacaagtca
acctatgcagcgatccgtaaagatgagtctgatgacgcaggactaggattctgttcctgc
tgctcgtggtggaagtggcttctggcactgatcttaggtcttctccttctgctgggactc
ctctgtggtctcatcacactgggtgaggaggtccggaagctgaaggctcgtgtggacgct
attgatggcggagaaagcacagtctctgctcgaaccagtcgtttttccgcctcctcagct
gtcaacatcattgatccactggagtcttcatacactgagcgcatccctggcgtccgtgcc
gataacactataaacctgggttcagcatctgctgcacaagaccctgtggttctgcagagg
gccatccaacagatcctcagatctgaacttcagtcggacaccattagagcttcactggca
acttcacttaagggtgagagaggagaacctgggcctaaaggagaccaaggacctcctgga
gtgaaaggtgatgcagggtttcctggaattccaggtcctcctggtctcattggtcaccct
ggacaggaaggtcctcgaggacccaaaggaagtgcaggtgaatcaggaaatgacggttta
cctgggccgaggggtcgagaggggccagcgggtcacagaggagaaccaggacccccagga
attggagagaaaggagagaaaggttcttctggcgatgttggtgcacctgggctagcagga
ccaccaggccctgtgggacccaaaggcgatgcaggtgcacgaggcgtaccaggtcttcca
ggagctcctggaccacaaggcttccgtggagactctggtgatcctggacccaaaggtgat
aaaggacctgctgggccacctggggtcaaaggcgatcaaggagagagaggtccacgtggt
gccactggtgagccaggtcaggtcggaccagcagggcctcctggtgagaaaggtcttaaa
ggatcagcaggtgctcctgggccagatggtgttaaaggaattcgaggggatcaaggtccg
attgggttgcctggagctcggggaccctcagggcctcctggagatgcaggaataccaggt
gcaccaggactccaaggaccaccaggtttgccaggtactccgggccagccaggagctaaa
ggtgagcctggtgagcccggaagagtcatttctgcaggcgctaatactaacactgtgcgt
gtacctggacctcctggacctcatggagctccgggtcctgctggaccatctggactatca
ggtcctattggtcctgctggtcttcctggtccacctggttcaaagggagataaaggagac
aaaggagaagatgggaagcctggagtctctgagagtgcagggaagaaagctccttctgaa
cctggtcctcctggcccacctggtccgccaggaccacctgggaatgatggacaaccaggt
attggtcaacctggtcctcctggtgaaaaaggtaaaccaggaagctttgtacccacttca
gaaaccttctttgctggaccacctgggcctcctggacctattggaccaaagggatcacaa
ggtgatattggtcctcaaggcttccctggccagcctggattacctggagaacctggaatc
ggtattccaagacagccagggacaccaggaccacgtggagaacaaggtcctgagggtcca
ccaggaccacagggacctcaaggaccaatgggtcccatagggccagaaggtccaaaaggt
gatgctggagtcccaggggcccctggcattccgggatactcctacggtggaggatccaga
agtgctccgggatcaccaggtccacctggacccccagggcctcctggagcacccggttca
tcgggtggcggttcaccagatgttgttcaacagatttcagactaccttagaagtgaaccc
atcagagaatacctgactggacctccaggcccacctggaccaccaggacctaccggatca
ggctctgaagatttgctagctaaccgtgtcattgaataccttcaaagagatgaggtgagg
cagtacctgattggtcctccagggcccccaggacccccaggtgtgccaggtggatatggc
tttaacactcaggaagttgctggacgagtgctgagactgttgaatgatgctggtttcaca
ggtctgccaggacctgccggtcccccaggacctcaaggaccaccaggaggctctggagga
ctattgtcttacgctgttaatgaaaaccaaccacaaatccatgcagagcctcaggagtat
atcaaaaggcacccaagctctgatgagaatttggattacgcagtcatcgctaaaaaggtt
tcagattacattaagtctcatggcctgttacaaggtcaagatggtgtgatagggattcca
ggttcacgaggtccaccaggtctaccaggtccaccaggtccaataggattcagtggaccc
cctggacgccctggacctccaggaatcagtccagaacttccttactccaacatgactgca
atcatagactacatcagagaccaccgtatgattggaccaccaggtataacagggcagaaa
ggggagccgggatattctggaccagtaggaccaaaaggtgacagaggattcacaggtcca
ccaggtaccccaggcttcccaggaatgaaaggagagaagggagagaagggtgaggcttca
tatgtcactcggaggaggaggaggaggagcagtcatttagaagagtgcatttag
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