Staphylococcus aureus subsp. aureus NCTC8325: SAOUHSC_01252
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Entry
SAOUHSC_01252 CDS
T00324
Name
(RefSeq) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sao
Staphylococcus aureus subsp. aureus NCTC8325
Pathway
sao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAOUHSC_01252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sao03019
]
SAOUHSC_01252
Messenger RNA biogenesis [BR:
sao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAOUHSC_01252
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
vATP-synt_E
HTH_10
Motif
Other DBs
NCBI-GeneID:
3919983
NCBI-ProteinID:
YP_499785
UniProt:
Q2FZ19
LinkDB
All DBs
Position
1204525..1206096
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AA seq
523 aa
AA seq
DB search
MFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDA
PVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCI
HTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVI
EHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGY
FDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI
TASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGE
FKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGN
IVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIV
EAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgttagatgctggacttatgtttccagaagacgaaatgctaggtattgatatt
gttataccagacatttcatacgtacttgaaaataaagataaattgaagggtatattcctt
acacacggacatgagcacgcgattggtgcagtgagttatgttttagaacaattagatgca
ccagtatatggatctaaattgacaatagcgttaattaaagaaaatatgaaagcccgtaat
attgataaaaaagttcgctactatacagttaataatgattcaattatgagattcaaaaac
gtgaatattagtttctttaatacgacacacagtattcctgatagtttaggtgtttgtatt
cacacttcatatggtgccattgtgtatacaggtgaatttaagtttgaccaaagtttacat
ggacattatgcaccagatattaaacgtatggcagagattggtgaagaaggcgtatttgtc
ttaatcagtgattctactgaggcagagaaacctggatataatactccggaaaatgtgatt
gaacatcatatgtatgatgcttttgcaaaagtgcgaggtcgcttgatagtttcatgttat
gcttcgaactttatacgtattcagcaagttttaaatattgctagcaagctaaatcgtaaa
gtgtcatttttaggaagatcacttgaaagttcatttaatattgctcgtaaaatggggtat
ttcgacattcctaaagatttgctaattcctataacagaagttgataattatcctaaaaat
gaagtgataattatagctactggtatgcaaggagaacctgtagaagccttaagtcaaatg
gcgcaacataagcataaaattatgaatatcgaagaaggcgattctgtatttttagcaatt
acggcttctgctaatatggaagttatcattgcgaatacattaaatgagcttgtacgtgct
ggcgcacatattattccaaataacaaaaagattcatgcttcaagtcatggttgcatggaa
gaattaaaaatgatgattaatattatgaaacctgaatactttattcctgtacaaggtgaa
tttaaaatgcagatagcacatgcgaagctagcagctgaagcaggtgttgcaccagaaaag
attttccttgtggaaaaaggagatgtcattaattacaacggtaaagatatgatattaaat
gaaaaggtaaattcaggaaatattttaatagatggcattggtattggggatgtaggaaat
atcgtgttgagagaccgtcatcttttagcagaagatggtatctttattgctgttgtaacg
ttagatcctaaaaatagacgtatagctgcgggacctgaaattcaatctcgtgggtttgta
tatgtacgtgaaagtgaagacttattacgtgaagcagaagagaaagtacgtgaaatagta
gaggctggtttacaagaaaaacgcatagaatggtctgaaattaaacaaaatatgcgtgat
caaattagtaaactattattcgaaagtacaaaacgtcgtcctatgattattccagtaatt
tctgaaatttaa
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