Scedosporium apiospermum: SAPIO_CDS7380
Help
Entry
SAPIO_CDS7380 CDS
T06367
Name
(RefSeq) Polyribonucleotide nucleotidyltransferase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SAPIO_CDS7380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS7380
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SAPIO_CDS7380
Spliceosome [BR:
sapo03041
]
Complex C
Other components
Step II factors
SAPIO_CDS7380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Methyltransf_11
S1
HA2_C
Helicase_C
Methyltransf_23
Methyltransf_12
Methyltransf_25
Methyltransf_31
HA2_N
DEAD
AAA_22
NNMT_PNMT_TEMT
Anamorsin_N
ABC_tran
AAA_19
AAA_30
AAA_14
nSTAND3
Methyltransf_9
T2SSE
Transformer
AAA_16
PhoH
SRP54
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
27726452
NCBI-ProteinID:
XP_016641086
UniProt:
A0A084G1S5
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MDRFRSYTEPWDPIRYGIWAIYAQSKEAFFSGRYPDLFNLKYLLDSGFYLWFKVLNEHFC
RFEQNQTTIPVLVPASTGVVLELGPGMGNQLHRFDRTKVTRVVGVESNSHFTRDIETQVK
KNGLEDIYELVTCRVEDSDVLETHGVVAESVDTVLSIQVLCSVDNPEAVIKELYRLLKPG
GKFIFWEHHRNSDRTTAAIQFHRLPIDVVGRSKMDDLLQLEQFALASKVQAEINNHTGVS
DKTLAEFIIAQRLECEDLAAFKQRLKSIGADFPTSLVESIDRLCRSLHPKLKKKQGAANK
IEEEEHPTRSNEEKAKIFSGLALPDKEVPPESNGDAIDDTLAQLESLGGRPRKPKESRKR
SRSPEDGDRDSRRRNHRERDRSRDRSRDRDSRRKRYRSRSRSPPRYQGELDPAPIIDKIY
DGKVTGVKDFGAFVSLEGIKGRCTGLIHISRLAEGRRIGHPSEVVSMGEPVKVKVVSIEG
NRIGLSLKDVDQHTGEDLAAPAPAFGSGANMEALGSRHGFVDQPTSFRNPQPPRHKKQLT
DSDRWEIRQLIRSGVAKASDFPELEEETKAVHKEDGGMELEEDVDIEVREEEPPFLVGQT
KQSLELSPIRVVKAPDGSMNRAAVTGSALVRDRKEARQQEADAEAHAAPKDDLSAQWHDP
MADPDKRTFASELRKARINAKSDVVPEWKKTVQNRDQSFGKRTNLSIKEQREGLPIFAFR
SQLISAVKENQILIVVGETGSGKTTQLTQYLAEAGFANSGMIGCTQPRRVAAMSVAKRVS
EEVGCKLGEEVGYTVRFDDTTTPSTRIKYMTDGMLQREILMDGDLKRYSVIMLDEAHERT
IATDVLFALLKKTVKRRPDLKIIVTSATLDADKFSSYFNECPIFTIPGRTYPVEILYSRE
PESDYLEAALLTVMQIHLTEPKGDILLFLTGQEEIDTSCEILYERMKALGPDVPELLILP
VYSALPSEMQSRIFEPAPPGTRKVVIATNIAETSITIDDIYFVVDPGFVKQNAYDPKLGM
DSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTTIPEIQRQNLSLTILM
LKAMGINDLINFDFMDPPPVNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAK
VLIASVDLGCSDEMLSIVAMLGMNVFYRPKEKQTQADQKKAKFHDPHGDHLTLLNVYNSW
KRSGYQNAWCFENYIQHRSMKRSKDVRDQLVKIMERYRHPIVSCGRDTHKVRQALCSGFF
RHSARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELVLTTKEYMHWTTVIEPKW
LVEAAPTFFKVAPTDRLSKRKQAERIQPLFNRFEGPDDWRLSAQRRVGRSGGGGGTWG
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctttcgcagctataccgagccatgggaccccatccgatatggcatctgggcc
atctatgcccaatcaaaagaggcctttttcagtggcagataccccgatctttttaacctc
aaatatctcctagactcggggttttatttgtggtttaaagttctgaatgagcatttttgc
cgctttgagcaaaatcaaaccactatcccagttcttgtcccagcttctactggtgtggta
cttgagctcggtcccggaatgggtaaccaactgcaccgcttcgacaggacaaaggtgact
cgtgtcgtgggcgtggagagcaactcgcacttcacacgagatattgagacacaggtcaag
aaaaacggtcttgaagacatttacgagctcgttacatgccgtgtggaagatagcgacgtg
ctagaaacgcatggtgttgttgccgagagtgtggatactgtcctgagcatccaggttctg
tgctcggtggacaacccggaagccgttatcaaggagctttaccggctgcttaagcctggt
gggaagttcatattctgggagcatcaccgtaactcggaccgtactactgccgcaatccaa
tttcatcgcctcccgatagacgtggtcgggcgctctaagatggacgacctcttacagctg
gagcagtttgctctggcttccaaagtacaagccgaaattaacaaccacacaggcgtctcc
gacaagacccttgccgaattcatcatcgcccagcggctcgaatgcgaagaccttgccgct
ttcaagcagaggctaaaatctatcggcgccgatttccctacgagtttggtcgagagtata
gaccggctgtgcaggtcactacacccgaagctcaagaagaagcaaggcgccgcgaacaag
atcgaagaggaagagcatccgacgcgaagtaatgaggagaaggcaaaaatattttcaggg
ttggcgcttcctgacaaggaagtcccgcctgagtcgaatggcgatgcgatagatgatacc
ctggcgcagttggagagtttaggagggaggccgcgcaagccgaaagagtcgcgaaaacgt
tcacggtcccccgaagacggcgacagagattcgaggagacgaaaccatagagaacgagat
cggtcacgcgacagatcgcgagaccgagattcgcggaggaagagatatagatcaaggtcg
agatcaccaccgaggtaccaaggagaactggaccccgcgccgattatcgacaagatctat
gacggaaaggtcacgggcgtcaaggattttggcgcatttgtgtccctagaaggtatcaag
gggcgatgtactggcctaatacatatatcgaggctggccgaaggccgacgcattggccac
ccttctgaggtagtatctatgggtgagcccgtcaaggtcaaagtcgtcagcatcgaagga
aacaggataggcctgtcgctcaaggatgtcgaccaacacaccggtgaggatctcgcggcc
ccggctcccgcctttggatccggtgccaacatggaggccttgggaagccgacatggcttc
gtcgaccagcccacatcattccgcaatccacagccgccgaggcacaagaagcaattgaca
gattcggacagatgggagatacgacagctcatccgctccggagtagcgaaggcatcggac
tttcccgaacttgaggaggagacgaaagcagtccataaggaagacggtggcatggagctg
gaggaggatgtcgatattgaagttcgagaggaggaacccccattcttggttggccaaaca
aagcagtctctggaactttccccgatccgcgttgtcaaggctcctgatggttcgatgaac
cgagcggccgtaacgggatcggcgctcgtgagggacaggaaggaagctcgccagcaagag
gcagatgcggaagcgcatgcagcgcccaaggatgacttatccgcgcagtggcatgaccct
atggcagacccggataagcgaacatttgcgagcgagctccgaaaggcccggataaacgca
aagtcggatgttgtgccggagtggaagaagaccgtccagaatagggaccagtctttcgga
aagcgaaccaaccttagcatcaaggaacagcgagagggcctccccatattcgcctttagg
tcacagctcatcagtgcggtgaaggagaaccagattcttatcgttgttggtgagacggga
tccggcaaaaccacgcagctcacccagtatcttgctgaagcaggctttgcaaatagtggc
atgattgggtgtacacagccgcgtcgtgtcgcggccatgtctgtcgccaagcgtgtctcc
gaggaagttggctgtaagcttggcgaggaggtcggatacacggttcgtttcgacgacact
accactccttcgaccaggatcaagtacatgacggatggtatgttacaaagagagatcctc
atggatggcgatctgaagcgctactccgtcatcatgttggacgaggcccacgagcgaacc
atcgccacagatgttcttttcgcccttttgaagaagacggtcaagcgtcggccggacctc
aagattatcgtcacctctgcgaccctcgacgcagataaattctcgagctattttaacgaa
tgccctatctttacgattcctggacgaacgtaccccgtggaaatcttatattcgagagag
cccgagagcgactacctcgaggctgcccttcttactgttatgcagattcacttgacagaa
cccaaaggagatattcttctcttcttaacgggccaggaggagattgacacctcatgcgaa
attttatatgaacgtatgaaagctctgggtcctgatgtgccagaactccttattctcccc
gtttattcggccctgccgagcgaaatgcagagtcgaatcttcgaaccagcgccgccggga
accagaaaagtcgtcattgcgacaaatatcgccgagacctccattaccattgacgacatc
tactttgtcgtagatccaggcttcgtcaaacaaaacgcgtatgatccaaagctcggtatg
gactcgcttgttgtcacaccaatttcacaggcccaggcaaaccagcgagcaggtcgagcc
ggccgaactgggcccggaaaatgcttcaggttatacaccgaggcagcgtaccaaaccgag
atgctgccgacgacgatcccagaaatccagcggcagaacttgtcgttaactattctcatg
ctcaaagccatgggcatcaacgatcttatcaactttgacttcatggacccgcctcccgtt
aacactatgcttacagccctcgaggagctgtatgcgctcagcgctctcgacgacgagggc
ctgcttacccgcctcggacgcaagatggccgactttcctatggagccgtcactcgccaaa
gtcctaatcgcctcggtcgatctgggctgctccgacgaaatgctcagcatagtagcgatg
ctcggcatgaacgtcttctaccggcccaaggagaagcagacccaggccgaccagaagaag
gccaagttccacgatccgcacggcgaccacctgaccctgctcaacgtctacaacagctgg
aagcgcagcgggtatcagaacgcctggtgcttcgagaactacatccagcaccggtccatg
aagcgctccaaggacgtgcgcgaccagctcgtcaaaatcatggagcgctaccgccatccc
atcgtctcgtgcggccgcgacacacacaaggtgcggcaggctctctgctccggcttcttc
cgccactcggcgcgtaaggacccccaggaaggctacaagaccctcatcgagggcaccccc
gtgtacctgcatcccagctcggcgctgttcggcaagcaggccgagtgggtcatctaccat
gagctcgtgctgacaacgaaggagtacatgcattggacgacggtcatcgagcccaagtgg
ttggtggaggcggcgccgacgtttttcaaggttgcgccgacggataggctgtcaaagagg
aagcaggctgagaggatccagccgttgtttaataggtttgagggaccggatgattggagg
cttagtgcgcagaggagggttggaaggtctggtggtggtggaggtacttggggttag
DBGET
integrated database retrieval system
