KEGG   Salinispora arenicola: Sare_4351Help
Entry
Sare_4351         CDS       T00613                                 

Definition
(GenBank) DNA polymerase LigD polymerase domain
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
saq  Salinispora arenicola
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:saq00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Sare_4351
Enzymes [BR:saq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Sare_4351
DNA repair and recombination proteins [BR:saq03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Sare_4351
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(4917338..4918249)
Genome map
AA seq 303 aa AA seqDB search
MPADRLRVEVAGRTLELSNLDKVLYPAAGFTKGEVIDYYTRVAPVLLPHLSDRALTRIRF
PNGVDGGSFFEKNAPAATPSWVRTETLPAPGSTKGRESIDYVVADELPTLVWLANLAALE
LHTPQWRIGAYPDMMVVDLDPGPPAGLRQCCRVALLMRDRLADDGIDSYPKTSGKKGMQL
SCPIAGTQPADVVSGYARRIAQELERASPKLIVSKMARKLRAGKVFIDWSQNSAAKTTVA
PYSLRAQPVPSVSTPLTWTEVEAGGAGKRPSVRPYTAAEVLTRVAEQGDLLAPLLTGGPE
LPG
NT seq 912 nt NT seq  +upstreamnt  +downstreamnt
atgccggctgaccggctccgggtcgaggtggccggccgcaccctggagttgtctaatctg
gacaaggtgctctatccggcggctgggttcaccaagggtgaggtgatcgactactacacc
cgggtggctccggtgctcctgccgcacttgtccgaccgggcactgacccggatccgtttc
ccgaacggcgtcgacggcggctcgtttttcgagaagaacgctccggcggcgacaccgagc
tgggtgcgtaccgagacgttgcctgcccctggttcgacgaaggggcgggagagcatcgac
tacgtggtcgccgacgagcttcccaccctggtctggttggccaatctcgccgccctggaa
ctgcacacaccccagtggcgaatcggggcgtacccggacatgatggttgtcgacctcgac
ccgggcccaccggccggcctacggcagtgctgtcgggtggcgctgttgatgcgggaccgg
ctcgctgacgatggaatcgactcgtatccgaaaacctcgggaaagaagggcatgcagctc
tcctgcccgatcgccggaacccaaccggccgacgtcgtgtccggctacgcccgacggatc
gcccaggaactggagcgggccagtccgaagctgatcgtgtccaagatggcgcgaaagctg
cgagcgggcaaggtcttcatcgactggagccagaacagtgcggcgaagacgacggtcgcg
ccgtactcgttgcgcgctcaaccggtgccgtcggtgtccaccccgctgacctggaccgag
gtggaggccggtggggccggcaaacggccgtcggtcaggccgtacacggcggccgaggtg
ctcacccgggttgcggagcagggcgacctgctcgccccgctccttaccggcggccccgag
ctgccgggatag

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