Sorex araneus (European shrew): 101546960
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Entry
101546960 CDS
T07854
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04022
cGMP-PKG signaling pathway
sara04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
101546960 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101546960 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101546960 (TRPC6)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101546960 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
ING
XkdW
Motif
Other DBs
NCBI-GeneID:
101546960
NCBI-ProteinID:
XP_004604872
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEECLSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLSRVGDALLLAISKGYVRIVEAILSHPAFAEGKRLATSPSQSELQQDDF
YAYDEDGTRFSHDVTPIILASHCQEYEIVHTLLRKGARIERPHDYFCKCGECNQKQKHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVETCPSGADQSRPNLSRLKLAIKYEVKKFVAHPNCQQ
QLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALVYWFAPCSKMGKIMRGPFMKFVA
HAASFTIFLGLLVMNAADRFEGTKLLPNETSSDHAKQLFRMKTSCFSWMEMLIISWVIGM
IWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASVAQSIIDANDTLK
DLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQI
SLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKENEAFTTVEESFKTLFWAIFGL
SEVKSVVIKNNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINNSFQEIEDDADVEWKFA
RAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRLKKWVLELFQGHKKGFQEDAEMNKRN
EEKKFGIFGSHEALSKLSLDQKQLGHSKQSSIRSSEDFQLNSFNNPPRQYQKIMKRLIKR
YVLKAQIDKESDEVNEGELKEIKQDISSLRYELLEEKTQNSEDLADLIRKLGEKLSGEAN
QEESKR
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaccactccacaagcctatctattgaagaggagcgctttttagatgcagct
gagtatggcaacatccctgtggtgagaaagatgctggaagaatgcctctcactcaatgtc
aactgtgtggattacatgggccagaatgctcttcagttggcagtggccaatgagcacctg
gagatcacagaacttctgctgaagaaggaaaatctctctcgtgttggggatgccttactt
ctagctattagcaaaggttatgttcggatcgtggaagcaattctcagccatccagctttt
gctgaaggcaagaggttagcaaccagccccagccagtctgagctccagcaagatgatttt
tatgcctacgatgaagacgggacacgcttctcccatgatgtgacgcccattattttagct
tcccactgccaggagtacgaaattgtgcacaccctcttgaggaagggtgctcgaattgag
cgtccacatgattacttctgtaagtgtggcgaatgcaaccagaaacagaagcacgactcc
tttagccactccaggtctaggatcaatgcctataaaggactggcaagtccagcttacctg
tcattgagtagcgaagacccagtcatgacagctttagaacttagcaatgagctggcagta
ctggccaacattgagaaggaattcaagaatgactacaaaaaactatcaatgcagtgcaaa
gattttgttgttgggctccttgatctgtgcagaaatactgaagaagtagaagccatcctg
aatggggatgtggaaacgtgccccagcggagcagaccagagccggccaaacctcagccgc
ttgaaactcgccattaaatatgaagtgaaaaaatttgtggctcatccaaactgtcaacag
cagcttctgtccatctggtatgagaacctgtccgggctgcggcagcagacaatggccgtc
aagttcctcgtggtcctcgcggtggccatcgggctacccttcctggctctcgtgtactgg
tttgctccgtgcagcaagatggggaagataatgcgtggaccattcatgaagtttgtagca
cacgcggcctccttcaccatctttctgggactgctagtcatgaatgcagctgacagattt
gaaggcaccaaactccttcctaatgaaaccagctcagatcatgcaaaacagctgttcagg
atgaaaacatcctgcttctcgtggatggagatgctcattatatcctgggtgataggcatg
atatgggctgaatgtaaagaaatttggactcaaggacccaaagaatacttgtttgagttg
tggaatatgcttgactttggcatgctagcaatctttgctgcatcatttattgcaagattc
atggcattctggcatgcttccgtagcccagagcatcattgatgccaatgatacattaaag
gacttgacaaaagtcacattgggagataatgtgaaatactacaatttagccaggataaag
tgggacccctctgatcctcaaattatatctgaaggtctctatgcaattgccgtggtttta
agtttctccagaatagcgtatattttaccagcaaatgaaagctttggacctctgcagata
tcactgggaagaacagtaaaagatatcttcaaatttatggtcatattcatcatggtgttt
gtggcctttatgattgggatgttcaatctctactcatactacattggtgcaaaagaaaat
gaagctttcacaacagttgaggaaagttttaagacattgttctgggcaatatttggactt
tctgaagtgaaatcagtggtcatcaaaaacaatcacaaattcattgaaaacatcggttat
gttctttatggagtctataacgttacaatggtcatcgttttgctaaatatgttaattgca
atgatcaacaactcattccaggaaattgaggatgatgccgatgtggagtggaaatttgcc
agggccaaactttggttttcctacttcgaggagggaaggaccttgcccgtccccttcaac
ttggtgccaagtccaaagtctctgttttatctcttactgaggcttaaaaaatgggttttg
gagttgtttcagggtcataaaaaaggtttccaggaggatgcagagatgaacaagagaaat
gaagaaaagaaatttggaatttttggaagtcatgaagccctttcaaaattgtccctggac
caaaaacagcttgggcacagtaaacagtcaagtattagaagttcagaagattttcaatta
aatagtttcaataatcctccaagacaatatcagaaaataatgaagagactcattaaaaga
tatgtactaaaagcccagatagataaggagagtgatgaagtaaatgaaggggaactgaag
gaaatcaaacaggacatctccagtctccgctatgaactccttgaagaaaagacgcagaat
tcagaagatttagcagatcttattagaaaacttggggagaaactctcaggggaagcaaac
caggaggaaagcaagagataa
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