Sorex araneus (European shrew): 101547015
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Entry
101547015 CDS
T07854
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03082
ATP-dependent chromatin remodeling
sara04714
Thermogenesis
sara05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101547015 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101547015 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101547015 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101547015 (SMARCC2)
03036 Chromosome and associated proteins [BR:
sara03036
]
101547015 (SMARCC2)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101547015 (SMARCC2)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101547015 (SMARCC2)
PBAF complex
101547015 (SMARCC2)
GBAF(ncBAF) complex
101547015 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
Motif
Other DBs
NCBI-GeneID:
101547015
NCBI-ProteinID:
XP_004601661
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDK
NNASHVVFPVPGNLEDEEWVRPVMKRDKQVLLHWGYCPDSYDTWIPASEIEASVEDAPTP
EKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDK
KGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN
VEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPD
LHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMID
TYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHF
HVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLN
FPDKGKEKPTDMQNFGLRTDMYAKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDW
NKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFL
ASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGI
AGTTSDEPERIEESGTDEPRAEGQATEEKKEPKEPREGVGAVEEETKEKPSETPKKDEEK
GKEGDSEKESEKSDGDPAVEPEKEKEAKEGQEEVLKEAVEPEAERKTKVERDIGEGNLST
AAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREAL
EYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQPPPPPVLPPGSQPIPPAGTAGP
PVVHSLAMAQASVAPAPAGSGAPPGGLGPSEQIGQAGPTAVPPQQPPAGAPQPGAVPPGV
APPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGPPLPPDPTAPSPGTVTPVPPPQ
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcccgcatggaccgcaatgtggagatgttcatgaccatcgagaagtctcta
gtgcagaataattgcctgtctcggcccaacatttttctgtgcccagaaatcgagcccaaa
ctactggggaaactaaaggacattatcaagagacaccagggaacagtcacggaggataag
aacaacgcctcacacgtggtgtttcccgtccccgggaacctggaagatgaggaatgggtg
cgaccagtcatgaagagggacaagcaggtcctcctgcactggggctactgtccggacagt
tatgacacgtggatcccagccagtgaaatcgaagcatcagtggaagatgctccaacgccc
gagaaacctaggaaggttcatgcaaagtggatccttgacaccgacaccttcaacgaatgg
atgaacgaggaagactatgaagtgaatgatgacaaaaaccccgtttcccgccggaagaag
atttcagccaaaactctgacagatgaggtgaacagcccagattccgatcgacgggacaag
aagggggggaactataagaagaggaaacgctccccctctccttcgccaaccccagaggct
aaaaagaaaaatgctaagaaaggtccctccacaccttacaccaagtccaagcgcggccac
agagaagaagagcaggaagacttaacaaaggacatggacgagccctcaccagtccccaac
gtggaagaggtgacactgcccaagacagtcaacacgaagaaggactcggagtccgcccct
gtcaaaggaggcaccatgacggacctggatgaacaggaggacgagagcatggagaccacg
ggcaaggatgaggacgagaacagcaccgggaacaagggggagcagaccaagaaccccgac
ctgcacgaggacaacgtgacggagcagacccaccacatcatcatccccagctacgccgcc
tggttcgactacaacagtgttcatgccatcgagcggcgagctctccccgagttcttcaac
ggcaagaacaagtccaagaccccagaaatctatctggcctaccggaacttcatgattgac
acgtaccggctaaacccgcaggagtatctcacgtccaccgcctgccgcaggaacctggcg
ggtgacgtctgtgccatcatgagggtccatgccttcctcgaacagtggggtctcattaac
tatcaggtggacgcggagagccggccaaccccgatggggcccccacccacctctcacttc
cacgtcctggcggacacaccctcggggctggtgcctctgcagcccaaaaccccgcagggc
cgccaggtcgatgcggacaccaaggctgggcgcaagggcaaagagctggatgacctggtg
ccagagacggccaagggcaagcccgagctgcagacctctgcctcccagcaaatgctcaac
ttcccggacaaaggcaaggagaagccgaccgacatgcagaacttcgggctgcgcaccgac
atgtacgccaagaagaacgtcccctccaagagcaaagctgcggccagtgccacccgggag
tggacggagcaggagacgctgctccttctggaggccctggaaatgtacaaagacgactgg
aacaaagtgtccgagcacgtgggcagccgcacgcaggacgagtgcatcctgcacttcctc
cgccttcccattgaagacccgtacctggaggactcggaggcctccctgggccccctggcc
taccagcccatccccttcagccagtcgggcaaccccgtcatgagcaccgtcgccttcctg
gcgtccgtcgtggaccctcgagtcgcctctgccgctgccaagtcggccctagaagagttc
tccaagatgaaggaggaggtgcccacggccctggtggaggcccacgtgcgcaaagtggaa
gaagcggccaaagtgacaggcaaggccgacccggccttcggcctggagagcagtggcatc
gcagggaccacgtcggacgagcccgagcggatcgaggagagtggaactgatgagcctcgc
gcagagggccaggccacagaggagaagaaggaacccaaggaaccgcgtgaaggagtcggg
gctgtagaggaagagacgaaggagaagcccagtgagacccccaagaaagacgaagagaag
gggaaggaaggcgacagtgagaaggagtcggagaagagcgacggggaccccgcggttgag
cccgagaaggagaaggaggccaaggaagggcaggaggaggtgctgaaggaggccgtggag
cccgaggccgagaggaagaccaaggtggagcgggacatcggggagggcaacctgtccacc
gctgccgccgccgccctggctgccgccgccgtgaaggccaagcacttggcagccgtggag
gagaggaagatcaagtccctggtggccttgctggtggagacgcaaatgaagaagctggag
atcaaactgcggcactttgaggagctggagacgatcatggaccgggagcgggaggcactg
gagtaccagcggcagcagctgctggccgacaggcaggccttccacatggagcagctcaag
tacgcggagatgcgcgcccggcagcagcacttccagcagatgcaccagcagcagccgccg
ccgccgcccgtgctgccgcccggctcgcagcccatcccgcccgccggcaccgcggggccg
cccgtcgtccacagcctggccatggcacaggcctccgtggccccggcccctgctggcagc
ggggccccccctgggggcttgggcccctccgaacagatcgggcaggcggggcccacggca
gtgcccccgcagcagccaccggcgggagcccctcagcccggggcagtcccgccaggggta
gccccccctggaccccacggcccctcaccgtttcccaaccaacaaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcggacccaggcccgcccctg
ccaccggacccgacggcccccagcccaggcacagtcacccctgtgccgcctccacagtga
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