Sorex araneus (European shrew): 101548274
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Entry
101548274 CDS
T07854
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
101548274 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101548274 (SCN2A)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101548274 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
101548274
NCBI-ProteinID:
XP_004601173
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINVTSFFNNSL
DGNGTAFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYVCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGL
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEEVVRKSESVDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSTVSQASRASRVIPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPTGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPATRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEHFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQRGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATT
SSSEGSTVDIGAPAEGEQPKVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVS
VVNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVE
LQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQE
MTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFAKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRR
YLLKQKVKKVSSIYKKDKGKEGEGTPIKEDIIIDKLNENSTPEKTDMTPSTTSPPSYDSV
TKPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcacttgctgctattgaacaacgaattgccgaagagaaagcaaagagacccaaacaagag
cgcaaagatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatctatggagacatacctccagagatggtgtcagagccactggaggac
ctggacccatactatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tcacgattcagtgccacctctgccctgtacattttaactcccttcaaccctattagaaaa
ctagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagattggaccaaaaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggtttttgt
ttagaagattttacatttctacgggatccatggaactggctggatttcacagtcattact
tttgcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagactattgttggggcc
ttgatccagtcagtgaagaagctctcagatgtcatgatcctgactgtgttctgcctgagc
gtgtttgcactaataggactacagctgtttatgggcaatttgcggaataaatgtttgcaa
tggcccccggataattcttcctttgaaataaatgtcacttccttctttaataactcgttg
gatgggaatggtactgctttcaataggacagtgagcatgtttaactgggatgaatatatt
gaggacaaaagtcacttttattttttggaaggacaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggctatgtctgtgtgaaagctggtagaaaccca
aactatggctacacaagttttgacacctttagttgggctttcttgtcgttatttcgtctc
atgactcaagatttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgcttgtaattttcttgggctcattctaccttataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaacacttgaagaggctgaa
cagaaagaagccgaatttcagcaaatgcttgaacagttaaaaaagcaacaagaagaagca
caggcagcagctgcagcagcatctgctgagtccagagacttcagtggtgcaggaggacta
ggagtattctctgagagttcttcagtggcatcaaagttgagttccaagagtgaaaaagag
ctgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagagaaggaa
gaagtagttcgaaaatctgaatctgtagacagcataagaaggaaaggtttccgtttttcc
ttagaaggaagtaggctgacatacgagaaaagattttcttctccacaccagtctttattg
agcatccgtggctcgcttttctctccaagacgcaacagcagggcaagcctgttcagcttt
agaggtagagcgaaggatattggctcggaaaacgactttgctgatgatgagcacagtacc
tttgaagacaatgacagtcggagggactctttgtttgtgccacacagacatggggagcgt
cggcacagcacggtcagccaggccagtcgcgcctccagggtgattcccatccttcccatg
aatggcaagatgcacagtgctgtggactgtaacggtgtggtttccctcgtgggcggtcct
tctgccctcacatctcccactgggcagctcttgccagagggcacaaccactgaaacagaa
ataagaaaaagacgatccagttcttatcatgtttccatggatttattggaagatccggcc
acaagacaaagagcaatgagtatggccagtattttgaccaatactatggaagaactcgaa
gaatccagacagaaatgtccaccctgttggtataaatttgctaacatgtgtttgatttgg
gactgctgtaaaccatggttaaaggtgaaacatatagttaacttggttgtgatggaccca
tttgttgatctggccatcaccatctgcattgtcttaaacacactcttcatggccatggag
cactatcccatgacagagcacttcagcaatgtgctatcagttgggaatctggtcttcact
ggaatatttaccgcagaaatgtttctcaaaataattgctatggatccatactattacttt
caagaaggctggaatatttttgatggtttcattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttctccgatcatttcgactgcttcgagttttcaaa
ttagccaaatcttggccaactctgaacatgctgataaagatcattggaaattccgtgggg
gctctgggtaacctcactttagtgttggccatcatcgtcttcatttttgctgtggttggc
atgcagctctttggtaaaagctacaaagaatgtgtctgcaagatctccaatgactgtgaa
ctcccacggtggcacatgcatgacttcttccactccttcttgattgtgttccgtgtgttg
tgtggagagtggatagagacaatgtgggactgtatggaggtcgctggccaaaccatgtgc
cttactgtgttcatgatggtgatggtgattggaaacctagtagttctgaacctcttcctg
gccttgctcttgagttcattcagttctgacaatcttgctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagagaggaatagattatgttaaaagg
aaattacgtgaatttattcaaaaagcctttgttagaaagcaaaaagctctagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccatactactata
gaaataggcaaagacctcaattatctcaaagatggaaatggaacaactagtggtataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtcatttataaataacccc
agccttactgtgacggtaccaattgctgttggagaatctgactttgaaaatttaaataca
gaagaattcagcagtgagtcagatatggaggaaagcaaagagaagctaaatgcaactact
agttcatctgaaggcagcacagttgatatcggagctcctgctgagggcgaacagcccaag
gttgaacccgaagaatccctggagcctgaagcctgctttacagaagattgtgtacggaaa
ttcaagtgttgtcagataagtatagaagaaggcaaaggtaaactctggtggaacctgagg
aaaacttgttataagatagtagaacacaactggtttgaaaccttcattgttttcatgatt
ctgctcagcagtggggcactggcctttgaagatatatatattgagcagcgaaaaaccatt
aagaccatgttagaatatgctgataaagttttcacttatatattcattctggaaatgctt
ctaaagtgggttgcatatggttttcaagtatattttaccaatgcctggtgctggttagat
tttctgattgtggatgtttcattggtcagcttaacagcaaatgccttgggttactcagaa
cttggtgccatcaagtccctgagaacactcagggctctgaggccactgagagccttgtct
cggtttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatctataatg
aatgttcttctggtttgtctgatcttttggctaatattcagtattatgggtgtgaatctt
tttgctggcaagttttatcactgtattaattacaccactggagaaatgtttgatgtaagt
gtggtcaacaactacagcgaatgtcaagccctcatagagagcaaccaaactgccaggtgg
aaaaatgtgaaagtaaactttgataatgtgggacttggatatctttctctgcttcaagta
gcgacatttaagggatggatggatatcatgtatgcagcagttgactcacgaaatgtagaa
ttacaacccaaatatgaagataatctatacatgtatctttattttgttatctttattata
tttggttcattcttcactttgaatcttttcattggtgtcatcatagacaacttcaaccaa
cagaaaaagaagtttggaggtcaagatatttttatgacagaagaacaaaagaaatactac
aatgcaatgaaaaagctaggttcaaagaaaccacaaaagcctatacctcggcctgctaac
aaattccaagggatggtctttgattttgtaaccaaacaagtctttgacatcagcatcatg
atcctcatctgtctcaacatggtcaccatgatggtggaaacagatgaccagagtcaagaa
atgacaaacattctatactggattaacctggtgtttattgttctgttcactggagaatgt
gtgctcaaactaatctctcttcgttactactatttcactattggatggaatatatttgat
tttgtagtggtcattctctccattgtaggtatgtttctggctgagctgatagaaaagtac
tttgtgtctcctaccctattccgggtcatccgtctcgccaggattggtcgaatcttgcgt
ctcatcaaaggggccaaggggatccgcactctgctctttgctctgatgatgtccctccct
gccctgttcaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggg
atgtccaacttcgcctatgtcaagagagaagttggaattgatgacatgttcaactttgaa
accttcggcaatagcatgatctgcctgtttcagatcaccacctccgccggctgggacggg
ttgttagccccgattcttaacagtgggcctccggactgtgaccctgaaaaagaccaccct
ggaagctcagtgaaaggagactgtgggaacccatctgttgggattttcttctttgtcagt
tacatcatcatatcatttctggttgtggtgaacatgtacatcgctgtcatcctggagaac
ttcagtgtagcgactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttc
tacgaggtctgggagaagtttgacccggatgccacccagtttatagagttcgctaaactc
tccgattttgcagctgcgctggatcctccacttctcatagcaaaaccgaacaaagtccag
ctcattgccatggacctgcccatggtcagcggggaccgaatccattgcctggacatatta
tttgcctttacaaagcgcgttttgggtgagagtggagagatggatgccctacgaatacaa
atggaagagagattcatggcatcaaacccttccaaagtctcctatgagccgattaccacc
acgttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttacagacgc
tatctcttgaagcaaaaagttaaaaaagtgtcaagcatatataagaaagacaaaggcaag
gaaggagaaggaacacctattaaagaagatatcatcatcgacaagctgaatgaaaattca
actccagagaagaccgatatgacaccttccaccacttccccaccttcatatgatagcgtg
accaagccagaaaaggagaaattcgaaaaagacaagtcagagaaggaagacaaaggaaaa
gatatcagggaaagtaaaaagtaa
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integrated database retrieval system
