KEGG   Streptomyces argyrophyllae: HKX69_32435
Entry
HKX69_32435       CDS       T09378                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sarg  Streptomyces argyrophyllae
Pathway
sarg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sarg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    HKX69_32435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sarg03400]
    HKX69_32435
Enzymes [BR:sarg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HKX69_32435
DNA repair and recombination proteins [BR:sarg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     HKX69_32435
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: QJS13636
UniProt: A0A6M4PVA2
LinkDB
Position
complement(7170428..7171450)
AA seq 340 aa
MTGPEVVEISAVTAVTLPLIPPMLATPGSLPPAAQDARWAYETKQDGQRVMAYLPGDGSV
LLRARSGEDITGAYPELRPLGGALGTVPAVLDGEVLALDERGRADFQLLQSRMGLAHAPA
RAARRAAQVPVHLVLFDVPYLEEPLVRLPYRRRRARLEELGLAGPYWSTPGAVTGHGAEA
LAATREHGLEGLVCKRLDSVYEPGVRSRAWIKIRNMRAEDVIVGGWLPGKGRLTGLPGAV
LAGQRDPEGRLRYVGGVGTGWSGAERARLADLLRDTASDRCPFDPVPRVPGARWVLPRLV
GEVSYSTRTRHGMLRQPSWLRLRPDLTPEESAADLPGEPG
NT seq 1023 nt   +upstreamnt  +downstreamnt
gtgaccggaccggaggtggtcgagatctctgccgtgaccgccgtgaccctgccgctgatt
ccgcccatgctcgcgacgcccggcagcctgccgcccgccgcgcaggacgcgcggtgggcg
tacgagaccaagcaggacggccagcgggtgatggcgtacctgcccggcgacggcagtgtg
ctgctgcgcgcccgctcgggcgaggacatcaccggcgcctaccccgagctccggccgctt
ggcggggcgctgggcaccgtccccgccgtgctggacggcgaggtgctggccctggacgag
cggggccgcgccgacttccagctgctgcagagccggatgggcctcgcgcacgcccccgcg
cgggcggcgcgccgggccgcccaggtcccggtgcacctggtgctgttcgacgtgccctat
ctggaggagcccctggtacggctgccgtaccgccggcggcgggcgcggctggaggagctg
gggctcgcggggccgtactggtcgacacccggggcggtgaccgggcacggcgccgaggca
ctggcggcgacccgggaacacggcctggagggcctggtgtgcaagcggctggactcggtg
tacgagcccggtgtgcgctcccgcgcctggatcaagatccggaacatgcgggccgaggac
gtgatcgtcggcggctggctgcccggaaagggccggctgacgggactgcccggagcggtg
ctggccggccagcgcgacccggagggccggctgcggtacgtcggcggggtgggcaccggc
tggagcggggccgagcgcgcccggctggcggacctgctgcgggacacggcgagcgaccgg
tgccccttcgaccccgtgccgcgtgtccccggcgcccgctgggtgctgccccggctggtg
ggcgaggtcagctacagcacccgcacccggcacgggatgctgcgccagccctcctggctg
cggctgcgcccggatctcaccccggaggagtcggcggcggacctgcccggggagcccggc
tga

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