Salmo salar (Atlantic salmon): 100136378
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Entry
100136378 CDS
T04363
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100136378
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100136378
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100136378
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1D. Rev-Erb
100136378
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100136378
NCBI-ProteinID:
XP_014056187
UniProt:
A0A1S3RWD9
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Position
ssa05:complement(54985944..54995916)
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AA seq
596 aa
AA seq
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MGSIKPGGVIAYISSGSASSPESCLSDSCSSGYLCSSPPHPSLPSRAVGIMVDIARPTTA
KHPRSHGTDKTGRSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQ
HSIRYKKCLKMENCTVIRINRNRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQ
NAMNNMMMNNNSQLHSTLHATQSPPCPMGGLPDDGSSSSPASSSSSISSSSGSNPSSPCS
AQDSMETSSSSASSCSSDSGDDEVPPSRVCHQGTFAYRREQQQAIKEEPEESPSPVAGET
VKDWRDSRMEELQGSWNRGNEDARGYQPSCNSHQHLTNGPYRDERVVYQQQPAQLNSTPS
GRMPEDSYSLHHRSHNTMHKVQTVSNGYSGPSYSLQDHKTNLVTPSLYVDPSQRSQEIWE
EFSLSFIPAVREVVGFAKKIPGFRDLSEYDQVSILKNGTFEVLMVRFASLFDMAERTVTF
LTGKCYSLELLRSLRAGELLTSMCDFSEKLAALQLDKDEMSLFVAVVLVSADRSGIQDLK
SVEALQDTLIRALRCLIMKNHANETTTFTKLLLKLPELRSLNNTHSEELLAFKVHS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatcaagcctggtggtgtaatagcctacatctcttctggctccgcctccagc
ccagagtcctgtttgagtgacagctgcagcagcggctacctgtgctcctctccgcctcat
ccctcactgccaagccgggcagtaggaatcatggtggacatcgcccgccctaccacagcc
aagcacccacgtagccacggcacagacaagactgggcgatccacctccgccaagagcagc
atcaccaagatcaacggcatggtgttgttgtgtaaggtgtgcggcgacgtggcctcgggg
tttcactatggcgtccacgcctgcgagggctgcaagggtttcttcaggaggagcatccag
catagcatccggtataagaagtgcctgaagatggagaactgcaccgtcataaggatcaac
aggaaccgctgtcagcagtgccgcttcaagaagtgtctggctgtgggcatgtctagagac
tctgttaggtttggccgcatcccaaagagagagaagcagcgcatgctgctggagatgcag
aacgccatgaacaacatgatgatgaacaacaacagccagctccacagtacgctccacgcc
acccagagcccaccctgccccatgggagggctccccgatgacggcagctcctcttcaccc
gcctcttcttcctcatctatctcgtcttcatcaggctccaacccttcctcaccctgttcc
gctcaagactccatggagaccagctctagctccgcctcttcctgttcatcggatagcggc
gatgacgaggttcctccttccagggtgtgtcaccagggcacattcgcgtaccgccgtgag
cagcaacaggccatcaaagaggaaccggaggagtcaccttcgccggtcgccggggaaact
gtgaaagactggagagacagccgcatggaggaactgcaggggagctggaaccgcggcaac
gaagacgccaggggttaccaacctagttgcaacagccatcaacacctcaccaacggtccc
taccgggacgagagagttgtttaccagcagcagcctgcgcagctaaacagcacccccagt
ggtagaatgccagaagactcctacagcctccatcacaggagccacaacacaatgcacaaa
gtacagaccgtctccaatggttacagtggaccatcatacagcctacaggaccacaagaca
aacttggtcactcctagtctctatgtggaccccagccagcgcagccaggagatctgggag
gagttctccctgagtttcatcccggccgtgcgcgaggtggtggggtttgccaagaagatc
ccgggcttccgagacctctccgagtacgaccaagtcagcattctcaaaaacggaacgttt
gaagtgcttatggtgcgcttcgcttctctgttcgacatggccgagcgcactgtgaccttc
ctgacagggaagtgttacagcttggagctgctgcgctcgctgcgggccggggagctgctc
acctccatgtgtgacttcagcgagaagctggccgctctgcagctggacaaggatgagatg
agcctcttcgttgccgtcgtcctcgtctccgccgatcgttcggggatccaggacttgaag
tcagtggaggcgctgcaggacacgctgatccgagcgctgcggtgtctgatcatgaagaac
cacgccaacgagactaccaccttcaccaagctgctgctgaagctgcccgagctgcgctcc
ctcaacaacacacactctgaagaactgctggccttcaaagtgcactcgtaa
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