Salmo salar (Atlantic salmon): 100196751
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Entry
100196751 CDS
T04363
Symbol
tnr1a
Name
(RefSeq) Tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04150
mTOR signaling pathway
sasa04210
Apoptosis
sasa04217
Necroptosis
sasa04920
Adipocytokine signaling pathway
sasa05132
Salmonella infection
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100196751 (tnr1a)
04150 mTOR signaling pathway
100196751 (tnr1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100196751 (tnr1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100196751 (tnr1a)
04217 Necroptosis
100196751 (tnr1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100196751 (tnr1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100196751 (tnr1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
100196751 (tnr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sasa04050
]
100196751 (tnr1a)
04090 CD molecules [BR:
sasa04090
]
100196751 (tnr1a)
Cytokine receptors [BR:
sasa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100196751 (tnr1a)
CD molecules [BR:
sasa04090
]
Proteins
100196751 (tnr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
100196751
NCBI-ProteinID:
NP_001135245
UniProt:
B5X3D9
LinkDB
All DBs
Position
ssa02:complement(10268375..10280056)
Genome browser
AA seq
404 aa
AA seq
DB search
MDVLRGKWKEKCILNVCALLVLCWSVDPYLLAPPPEGSQCPDGSHYHNANGTCCRKCHEG
FKLKEHCTKDGENSQCVPCEEGRTYREKSNYVKTCLRCTLCVDNEEEESPCKKSSNTLCR
CKKGFYKNRINSETRECLSCKTCGPGERETQPCTQESDTVCECKDFYFRDKKNNKTCLPC
QICELTADCQQECSSGTHPTPNGVAKPEDTGWDVWSPYLLALSVCVCVLLLVVVGIMGVL
VVRRKPKGSSSFPSAEITSQGSETSTRRLIQEDPENVLNQSIPSYSPVCESEQEPLSTLP
DCVPKEIKISELIYSVLDQVPPRHVKELVRSLGVSDIVIERAENDHLRDTKEAQYQMLRV
WAKGNAQGGGEVLARPLLYHLLDKLRDMDLGGTAEELETKYRDQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcttgagagggaaatggaaggaaaaatgcattctgaacgtttgcgctctgctc
gtattgtgctggtcagtagacccctacctcttggcaccaccacctgaggggagtcaatgc
cctgacgggagtcattaccacaatgctaacgggacatgctgtcgaaagtgccatgaaggg
tttaagctgaaggagcactgcactaaggacggcgagaatagccaatgtgtcccctgtgaa
gagggcaggacgtaccgagagaagagtaactatgtcaagacctgcctccgttgtacactc
tgtgttgacaatgaggaagaggagtcgccatgcaagaagagtagcaacacactgtgtcgc
tgcaaaaaaggcttctacaaaaatagaataaactcggaaacacgggagtgcctcagttgc
aagacatgtggacctggagagagagaaacacaaccatgtactcaagagagtgacacagtg
tgtgaatgtaaggacttctacttccgagacaagaaaaacaacaagacctgtcttccatgc
caaatttgtgagctgactgctgactgccagcaggagtgttcttcaggcacacatcccact
cccaatggcgttgcaaaacccgaagacactggatgggatgtttggtctccctacctgttg
gctctgtccgtctgtgtttgtgtgttattactggtggttgtggggatcatgggcgtacta
gtggtccgacggaaaccgaaggggtctagctccttcccctctgctgagatcacctctcag
ggctccgagacgtctactcggaggctgatccaagaggacccagagaacgttctcaaccag
agtatcccttcatacagcccagtgtgtgagagtgaacaggagcccctcagcacgctaccg
gactgtgtccccaaggagatcaagatctctgagttgatctactcggtgttggaccaagtc
cccccacgtcatgtgaaggagctggtgcgttcgctgggtgtgagtgacatagtgatagag
agggctgagaatgaccacctccgtgacactaaggaagcccagtaccagatgctgagggtc
tgggctaagggaaatgcgcagggagggggagaggtgctagcacgccctctactgtaccac
ctgctggataagctgagagacatggacctgggagggactgcagaggagctggagaccaag
tatagagatcagtag
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