Salmo salar (Atlantic salmon): 106560542
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Entry
106560542 CDS
T04363
Symbol
swt1
Name
(RefSeq) SWT1, RNA endoribonuclease homolog
Organism
sasa
Salmo salar (Atlantic salmon)
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Gene cluster
GFIT
Motif
Pfam:
PIN_4
PIN_9
SWT1_3rd
Motif
Other DBs
NCBI-GeneID:
106560542
NCBI-ProteinID:
XP_013979002
UniProt:
A0A1S3KK30
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Position
ssa10:45571963..45607015
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AA seq
1070 aa
AA seq
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MSKKSKKKKKQKKEKETNKLSFSSSKSSQKEKSTKKRSSAEGKHHGSCSAEEKRGREKRV
SHSTPGNSAAGSSHKKDREFKKALYRLEKTTSQGAAEGKNACPLGTLPQDSSVRKSCPSQ
DGSATTGVKTADRVSSKPVSSLSTNKTQSQNVEKIPTSQGSSSKPSDKSPSKTASSRLAT
SPRSLMAQLKEQRKTLVKRRSRPEEKPGIGKDHTSQGRSYQDPQLSLSLAEEMREKRRKL
VKRRSEEEKEDVLKAKRDKSGAKSYSLPFNNNNNTTTKQSSTSTKNATFEKISDTERHRP
TTQKQGNVSDLSKTSATSKSTCAEVQMPLPKPQLPLNFKIPKKSKLVPLPVNRAIWGGDQ
EDNNDNKPISARVKVVSPASRLSQQTGSASKLWTPRSVSKLWTPRSVSKLCTPRSVSKSL
NSKGGVSAAVNKNKQHKCETVPESSKGCKELQPSSAQGMTSPPCNRTTSPEDYIEVYDND
QEMQLVEELHLARSEKRLELNVVEIYGELTSMDIDPSEEGITFTLGKEEDLQQDLIVVLD
TNILLSHLDFVKKMRSHGLGALGLPTVLIPWVVLQELDSLKNRKRLSSSVAHLATPAVHY
IYTCLKSQEPRLWGQSMQQASQSSQGLNAENNDDRVLQCCLQYQSLYPEGALILCTNDKN
LCSKALLSGVKAFGKADLVEEVDRLKTPGVHNLTPTQPHTQNPVSTQTQTLICTPSQTRD
HQKTSPFPGQQQNEQSRSDGGKEREMEEKRKKAAEEARELSSCVSVLEDCLKEVLSQVLE
IEMKEAYEELWTEIVYLKPPWTLEGLLQCFKKHWISVFGNIVPRNLQQSLENLHNFFFSG
KSVEHSSTVLALYEARDLLQAFGCRSDYDGRVQPALASLNTLLQRIVPQPEKVSEENHTC
DGDTLMEEEEEEEEKQTTPAQVSHQEVWVMFENIWNNVCGISSAVFAALRFDPGAIETNQ
PVEGPPLPQDALSCLHRLSTAVRQLLQAFTRVLSTDSCLEDAQALLSFIHSSEIAAMEPR
FTAKDLLDCLSQHEYREKLCVGGTQLAELNVSLERCAEVTSRQVTPSTWP
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaagtccaagaagaagaagaagcagaagaaggagaaggagacaaataagtta
tctttttcctccagtaagtcgtcacagaaggaaaagagcaccaagaaacgtagtagtgca
gaggggaagcaccatggcagctgttctgcagaggagaaacgggggagagagaaaagagtt
agccactccaccccagggaatagtgcagcagggagcagtcacaagaaagacagggagttc
aaaaaagctctctacagactggagaaaacaacctcgcagggtgcagcggagggaaaaaac
gcctgtcctcttggaacccttcctcaggacagctctgtgaggaagagttgccccagccag
gatgggtcggctaccaccggggtcaagaccgcagacagggtgtcttccaaaccagtcagc
agtctgagcacgaataagacccagtcccaaaatgtggagaagatccctacgtcccaggga
agctctagtaagccatccgacaagagcccctccaaaacagcctcgagcagactggcgacc
agtcccaggtccctcatggcgcagctgaaggagcagaggaagacgctggtgaaaaggagg
tccagacctgaggagaagcctggcattggtaaggaccacacctcccaaggtaggagctac
caagacccccaactgtccctgtcactggctgaagagatgagggagaagaggaggaagcta
gtgaagaggagatctgaagaagaaaaggaggatgttttaaaggctaaacgagacaagagt
ggagcaaaatcctatagtcttccctttaacaacaacaacaacaccaccacaaagcagtcc
tccacctctactaaaaacgctacctttgagaaaatctcagatacagaaagacatagacct
accacccaaaagcagggcaatgtctctgatctgtccaaaacatcagcgacatctaagtcc
acgtgtgccgaggtacagatgccgctacccaaacctcagctgcctctcaattttaagatc
cccaaaaagtccaaacttgtgccactgccagttaatagagccatctgggggggtgaccag
gaggataataacgacaataaacccatcagtgctagagtgaaggtggtgtctcctgcttct
aggctttctcagcagacaggaagtgcgtccaaactttggacaccaaggagtgtgtccaaa
ctttggacaccaaggagtgtgtccaaactttgcacaccaaggagtgtgtccaaatctttg
aactccaaaggtggtgtgtctgctgctgtgaacaaaaacaagcagcacaaatgtgaaacg
gttccagaatcttccaaaggttgtaaagaattacagcccagttcagctcaagggatgaca
tcaccaccctgtaacagaacaacttcccctgaagattatatagaagtctatgataatgac
caagagatgcagctggtggaggagctccatctggcccgcagtgagaagaggctggagctg
aatgtggtggagatctatggagaactcaccagcatggacatcgacccatcagaggagggc
atcacattcacactcggtaaagaggaggatcttcagcaggatctgatcgttgtcctggac
accaacatccttctcagtcacctagactttgtcaagaagatgaggtcacacggccttgga
gctctaggtctccccacagtgctcataccctgggtggtactacaggagctagactctctg
aagaacaggaagaggctgtccagctctgtcgcccacctggccacacctgccgttcattac
atctacacctgcctgaagagccaggagcctcgactctggggccagtccatgcagcaggcc
tctcagagcagccagggactcaatgctgagaataatgacgacagagtgctgcagtgctgc
ctgcaataccagagtctttacccagagggtgctctcatcctttgcactaatgataagaac
ctgtgtagtaaggcattgctgagtggggtgaaggccttcggtaaggctgacctggtggag
gaggtagacaggctcaaaacgcctggcgtccacaacctgacccccacccaaccccacaca
cagaaccctgtcagcacacagacacaaaccctcatctgcaccccgagccagacccgtgac
caccagaaaaccagccccttcccaggccagcagcagaatgaacagagcaggagtgatgga
gggaaagagagagaaatggaagagaagcgaaagaaggctgcagaagaggcccgggagctg
agcagctgtgtgtcagtactggaggactgtctgaaggaggtgctatctcaggtgctggag
attgagatgaaggaagcctatgaagaactgtggacagagatcgtatatctgaaaccgccc
tggactcttgaaggccttctgcagtgtttcaagaaacactggatctctgtctttggcaac
attgtccctcgaaatctgcagcaatccctggaaaaccttcacaacttcttcttctcgggt
aaatcagtagagcatagctctacagtgctggctctgtatgaggctagagatctgctgcag
gccttcggctgcaggtcagactacgatgggcgtgtccaaccggccctcgcctccctgaac
accctgctgcagaggatagtccctcagccagagaaagtctcagaggagaaccacacctgt
gatggtgacaccctcatggaggaggaggaggaggaggaagagaaacagaccacccctgct
caggtgtcacaccaggaagtgtgggtgatgtttgagaacatatggaacaatgtgtgtggg
atcagctctgctgtgttcgccgctctccgctttgatccgggcgccatagaaaccaaccag
ccagtagagggtcctccccttccccaggacgccctctcctgtctgcacagactgtctact
gctgtcagacaactgctacaggcctttaccagggttctgtcaacagacagctgtctagaa
gatgcccaggctctcctctccttcatccactccagtgagattgctgccatggagcccagg
ttcactgccaaagacctgttggactgtctctcacagcacgagtacagggagaagctgtgt
gtgggggggacccagttggcagagctgaacgtcagtctagagcgctgcgctgaggtcacg
tcccggcaggtcacaccaagcacctggccctga
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