Salmo salar (Atlantic salmon): 106561208
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Entry
106561208 CDS
T04363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106561208
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106561208
04261 Adrenergic signaling in cardiomyocytes
106561208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106561208
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106561208
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
VWA_CoxE
DUF2201
Motif
Other DBs
NCBI-GeneID:
106561208
NCBI-ProteinID:
XP_013980387
UniProt:
A0A1S3KP27
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Position
ssa10:85769408..85877734
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AA seq
1117 aa
AA seq
DB search
MNVRACVWTGSWRLAMDTYRPHAVLILLLLSSDFCLPSQFPTNLIIKEWVDQMQIELVTL
ADMASAGKNLTQIFLDNQNLYTVESNDAEELVARAARNIEQLLLKRAAALETLATFAENF
QMEHQWKDEYADGDIVYYNAKDNLEVNETEGRKNRIRPAFKEDMLFKRLTSHNHTAVHIP
TDIYDGSTIVLNELNWTEALEGVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKT
PSKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVGEMLETLSDDDYV
NVVYFNTRVNNTACFDHLVQANVRNKKILKDAVQNISAKGITNYTKGFEFAFEQLYATNV
TRANCNKIIMLFTDGGEERASAILQKYNADKKVRIFTFSVGQHNYDKGPVQWMACANKGY
FYEIPSIGAIRINTQEYLDVLGRPMVLADQLAKQVQWTNVYLDALELGLVITGTLPVFNK
TKYKDESGLEIQNQLILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQ
PKKRIRNRKTRLNKPYAITLHEEPVTLDFLDAELENDIKVQIRRMMIDGNPGEETIETLV
KTQDERYIDRGERTYTWAQVNGTDYSLALVLPTYSEHYIQAKLGDTIRQAMAPWGQKAMN
TLQVEMFDELGYTFIAPREYCKGLKDKDNNTQFLLDFNQFIDRNTLEEPCNVTLVSRLLL
DAGLTADLVKLWKEQTLGGILARFVATDGGITRVYPRSAGEEWTENAETYDSSFYKRTLD
NSIYIFTAPYFNKSRESGYESGILVSKAVDLNIDGVNLKPAVVGVKLNVSAWMNSFMNAT
IKVNCKDEICGCLKNDKHVDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVVMISLVNT
SLYSFYKTYDYQSVCDPERDSKAAAGPRSVYVPTIADMLSIGWWASTAAWSIIQQLFYGL
IFPSFLEAADSDDDMSANMFKESCITEQTQYFFDNEERSYSGVLDCGNCSRMYRAEKLPN
TNLVFLITDAKATCLSCDARPLRQAEQPSQGPDPCELAQNPRYRKGPDVCFDNNIDDEPL
CPISGVSGLSPVPLLLLLQVLMLGPGRMILTVGAGPL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgtgcgtgtgtttggacggggagttggcgcctggcaatggacacctacaga
ccacacgccgtgttgattttactgttattatcgtcggatttttgtctgccgtcgcagttt
ccaacaaatctcataataaaggaatgggtggatcagatgcagatagagctggtgaccctg
gcagacatggccagcgccgggaagaacctcacacagatcttcctggacaaccagaacctg
tacacagtagagtctaacgatgctgaggaactagtggctagggcagccaggaacatagaa
cagctgctgctgaagagggctgcagctctggagactctggccacatttgctgagaatttc
cagatggaacaccagtggaaggatgagtatgcggatggtgacattgtttactacaatgca
aaggacaatttggaggtgaatgagacagagggtcggaagaaccggatcaggccagccttt
aaggaagatatgttgtttaaacgcctcacctctcacaaccacactgctgtacacatccct
actgacatctacgatggctccaccatcgtgctgaatgaattgaactggacggaggcactg
gagggtgtgtttaagaagaacagagaggatgaccctactctgctctggcaggtgtttggt
agtgctactggactggcccgatactacccagcctctccatggatggatgctcggaagacc
cccagtaaaatcgacctgtacgacgtacgcaggagaccctggtacattcagggagctgcc
tcacccaaggacatgctgatcctagtggacgcgagtggcagtgtgtctggtctgactctg
aagctgatcaggacctctgtcggtgagatgctggagactctgtctgatgatgactatgtc
aacgtggtctatttcaacaccagggtgaataacacagcgtgttttgaccacctggtccag
gccaacgtgaggaataagaagatcctgaaggatgctgttcagaacatctctgctaaaggc
atcaccaactacaccaaaggatttgagtttgccttcgaacagctctatgcaactaacgtc
accagagccaactgtaacaagatcatcatgctgttcactgatggaggagaggagagagcg
tcggccatactgcagaaatacaacgctgacaagaaggtgcgtatcttcaccttctcagtg
ggtcaacacaactatgataaaggtccagtccagtggatggcctgcgctaataaaggatac
ttctatgagattccttctattggagccatacgcatcaacactcaggagtacctggatgtc
ctgggcagacccatggttctagctgaccagctggccaagcaggtccagtggactaatgtc
taccttgacgctctggagctaggtctggtcatcacaggaaccctacctgtcttcaacaag
accaagtataaagatgaatcgggtttagagattcagaaccagttgatcctaggggtgatg
gggattgacgtgtcactagatgacatcaagaagctcacaccgcgcttcactattggacct
aatggatattattttgccatcgaccccaatggatatgtactgctacaccccaacctccaa
cctaagaaaaggatccgtaaccgcaagacaagactcaataagccgtatgccatcacgctc
cacgaggagcctgtcactctggacttcctcgatgctgaactggagaacgacatcaaagtc
cagatcaggagaatgatgatagatggcaacccaggtgaagagaccatagagactctagtt
aaaactcaggatgagagatacatcgacagaggagaaaggacgtacacctgggctcaggtc
aatggaacagactacagcttggccctggtcctgcctacctacagtgaacactacatacag
gccaaactgggagacaccatcagacaggccatggctccatgggggcagaaggccatgaac
actctgcaggtggagatgtttgatgagttgggatacaccttcatcgcccccagggagtat
tgcaaaggcttgaaggacaaggacaacaacacccagttcctcctggacttcaaccagttc
atagacaggaacacactggaagagccatgtaatgtgactctggtcagtaggctgctgttg
gacgctgggttgactgctgatctggtcaaactgtggaaggagcagacattgggcgggatt
ctggccaggtttgtagccactgatggagggatcaccagagtctatcccagaagtgctgga
gaggagtggacagagaatgctgagacatatgactcaagtttctacaagaggactctggat
aacagcatctatattttcaccgctccatacttcaacaagagcagggaatcaggctatgag
tcaggtattctggtgagcaaggctgtagacctcaacatagatggagtcaacctcaaacca
gctgtggtgggggtgaaactgaacgtctctgcctggatgaacagcttcatgaatgccacc
atcaaagtcaactgcaaggatgaaatctgtggctgtctgaagaatgataagcacgttgac
tgtgtcatcctggatgatggcggcttcctgctgatgtccaatcaggatgagtatatcact
cagattggccagttctttggggaggtagacccagtcgtgatgatcagtctggtcaacacg
tctctgtactccttctacaagacttacgactaccagtcagtctgcgatcctgagagagac
agcaaggctgctgcagggccacggtctgtctatgtgcccactatagcagacatgctgagt
ataggttggtgggcctccactgctgcctggtcgataatacagcagctcttctacggtctc
atattccccagcttcctagaggcagcggactcagatgatgacatgtcagctaacatgttt
aaggagagctgtatcacagagcagactcagtacttctttgacaacgaagagagatcctac
tcaggagtccttgactgtggaaactgctccaggatgtatcgggctgagaagctgcccaac
actaacctggtgtttctgatcactgatgccaaggccacctgtctgtcttgtgacgccaga
ccactaagacaagctgagcaaccctcccaaggtccagacccatgtgagctggctcagaac
cccagatacaggaaaggacctgatgtgtgtttcgacaacaacatagacgacgagcccctg
tgtccaatcagcggtgtctctggtctgagtcctgtccccctcctcctgttgctgcaggtt
ttgatgctgggccctgggaggatgattctgactgtgggagcgggacctctctaa
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