Salmo salar (Atlantic salmon): 106561686
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Entry
106561686 CDS
T04363
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1-A-like
KO
K08543
testicular receptor 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106561686
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106561686
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106561686
Nuclear receptors [BR:
sasa03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
106561686
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106561686
NCBI-ProteinID:
XP_013981345
UniProt:
A0A1S3KRK5
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Position
ssa10:108747237..108769684
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AA seq
624 aa
AA seq
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MDGHTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTP
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLSGQQIQFVTEGSDQALAKPVVEYC
VVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MVLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSASLLESSMLLNIQQPFPKLENTILVPTSPESNDPCQDDLSTLANVVTSLAHLNK
AREMNDVTDNNDLMGAEDTLSNGDSSMTDLQGDEQTACDITRAFDTLAKALNPGDGSAGD
SLEATMQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGQDNDINLMKACWNELFALGLAQCSNVMNVSTILAAIINHLQTSLQ
DGTGGDEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDVYEYAYLKAIILFSPDHPGIDNT
LQIERFQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMSAAVTEELFFTGLIGNVQ
IDSIIPYILKMESTDYNSQVGTGV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacggacacactcagaggattcagctggtctcagctgacggtggcatgatgggacat
cgtatccagatcgtgacggaccagtcgacgggccagaagatccagatcgtgacggcgttg
gagcagggttctggtggcaagcagcagtttatcctggctaatgcagactactctacgcca
ggcaaggtaatcctagccaagcaagaggcctcgtccccgggaaaggtgatcctggcggcc
ccagacggttcaggggtcaaccagctgctgtttgcctcacctgacctgtccggccagcag
atccagtttgtgacagaagggtcagaccaggcacttgccaagcctgtggtggagtactgt
gtggtgtgtggagacagggcctcaggccgccactacggggcagtgagctgtgagggctgt
aagggcttcttcaagcgcagcatcaggaagaacctggtttatacatgccgagggtctgga
gagtgtgtcatcaacaagcaccatagaaaccgctgccagtactgcagactgcagcgctgc
atggtcctgggcatgaaacaggactctgtccagtgtgagaggaagccggtggaggtctcc
agagagaagtctatcaactgtgctgcgtctacagagaagatctacatcaggaagaacctg
tgtagtcccctggctgccacgcccaccttcgtcactgacaaggagaccgccaggtactac
aaggagacagccaggtcagccagtttgctggagtcgagcatgctcctgaacatccagcag
ccttttcccaagctagaaaacaccatcctggtccccacatcccctgaatcgaatgacccg
tgtcaggacgacctgagcacgctggccaacgtggtgacgtcactggcccacctgaacaag
gcccgggagatgaacgatgttaccgacaacaacgacctgatgggcgcggaagacaccctt
agcaatggagacagctccatgacggatctccaaggagacgaacagactgcctgtgacatc
acccgagcgtttgacactctggccaaggccctgaaccctggggacggctcagcaggagac
tctctggaagccaccatgcagctgatgtcaggagaccagtctggccccgtggtggagctg
gaggggcctctgctctcagacagccacgtccccttcaagctgatgatgccgttgcccatg
ccggagtaccttaatgtgaactacatctgtgagtcagcctcgcggctcctcttcctgtcc
atgcactgggcacgctccatacctgccttccaagccttgggtggtcaggataatgacatt
aacctgatgaaggcgtgttggaacgagctgtttgctctgggcctggctcaatgctccaat
gtcatgaatgtctccaccatcctggctgccatcatcaaccaccttcagaccagcctacaa
gatggtacaggaggtgatgagaagctgtccccagagagagtgaagctggtcatggaacac
atctggaggatgcaggagttctgtaacagcatggccaagctatcccctgacgtttatgaa
tacgcctaccttaaagccatcatcctcttcagccctgaccacccaggtatagacaacacc
ctacagattgagcgtttccaggagaaagcctacatggagctacaggattatgtaactcgt
acctaccctgaagactcatatcggttatccaagctgctgcttcgtcttcctgccctgcgg
ctgatgagtgcagcggtgacagaggagctgttctttactggcctcatcggcaacgtgcag
atagacagcatcatcccttacatcctcaagatggagtccactgactacaacagccaggtg
ggcactggcgtctga
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