Salmo salar (Atlantic salmon): 106567028
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Entry
106567028 CDS
T04363
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106567028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106567028
04090 CD molecules [BR:
sasa04090
]
106567028
04091 Lectins [BR:
sasa04091
]
106567028
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106567028
CD molecules [BR:
sasa04090
]
Proteins
106567028
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106567028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Bravo_FIGEY
C2-set_2
Pur_ac_phosph_N
Ig_4
Sp38
V-set_CD47
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
106567028
NCBI-ProteinID:
XP_013991300
UniProt:
A0A1S3LK06
LinkDB
All DBs
Position
ssa13:34074888..34155452
Genome browser
AA seq
1293 aa
AA seq
DB search
MPRTQRQQVGSRGRRTPLPLLLLPLFSLLLSHTPQLSQAAIHIPPNYQINEFKKPPVITT
QPESITVFGAEDILLTCEASGNPRPEFRWKKDGMEFIPANYPGLSMSLGSGTFMTTGAGS
EPMSQYQGKYSCYADNELGTAVSNEVQLITENTPALQKEKKVKKKVEEGESVVLKCNPPF
STVPPVIHWMDKRLRHIELNDRVTQGRDGNLYFSHVTADDNRNDYTCNAQYLSARTILSK
EPISLTVTTSNSVVRNRRPQMMRPSGAHSTYHTLRGQSLELECIVQGLPTPTVQWMRKDG
QLSESRTFRDLSDRLLRFSNISESDGGEYQCSANNSQGTVTHTYTVSVEAAPYWTKEPVS
QLYAPGETVRLDCQADGIPSPAVTWSMNGNPITGIDLDPRRTVRDGTLILRDVVFTDTAV
YQCQAHNKHGTILVNTYIFVIELPPQILSADGQTYTVTEGQKAVLHCQTFGSPRPKVTWE
VDNGASLLADPRVNLLTNGSLQITNVSHDDEGLYTCSISNTNMSINTELEVLNRTVILSS
PGDLRVRPGKTVIFTCLAQVDSKLTPPHIQWRRSGQKLMQSYAEDKYTFEGPDLIVANVQ
TEDEGVYTCEVITNLDMAEASGSITLVDRPDPPTQLQVSDPKDRGVTLSWTAGDDHNSPV
IEFRVEFKDHVSNEWSWEELKSVSGTKESVNLALQPYVSYRFRVISINDIGKSDPSTPSD
LHSTPPQAPDNNPEDVRSESIDPDTLVITWEEMDRRVFNGPEFHYKVFWRRVVGDGPTWH
SNVTTEPPYIVTEVGNFSAFEIKVQAVNQKGEGPEPDPVIGYSGENVPLEAPMDVGVVLL
NSTAIRVTWAAVDRDTVRGHLLGYKIHLKRFGSRGHHRGRRAREPESSMVVETGANEEKR
VLGGLRPYSHYALTVTVFNSKGEGPRSDPPLSFSTDEGAPGPPMSLHLESPAETEMTLHW
TPPAQPNGVLKGYLLQYQQIVESDDSPVQVETIDDHTLTKLTLKQLDPKSRYRFYLRGRT
SAGDGEPITREGATTLDGAPPSNISLSVGEKSVNLSWVPGQRHRSVGFQVQYLNKNSGGK
WKQSEKLNSSQPFYQLKGLTPGSQYRLRFTFSNNTFWETEIRTEGAGVVDVQTGFATQGW
FIGLVSVIVLLLLVLLILCFIKRSKGGKYSVKDKEEGQVDSEARPMKDETFGEYRLWKRS
LESDNEEKRTASQPSLCDESKLCTSEDNLDGYNNGSSAVTEVNMEDSLVSQYSRPSEPTP
DPGTLQDSSPLNPTATTPTPTNNGLPNSAAILD
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcacgcagcgacagcaggttggcagtagggggcgacgcacccctctccccctc
ctccttctccctctcttctccctcctcctatcccacactcctcagctcagccaagcagct
atacacatacctcccaactaccaaataaatgaattcaaaaagcccccagtgatcaccacc
cagcccgagtccatcaccgtgttcggtgctgaagacatccttctgacctgcgaagcatca
ggaaaccctcgtccagagttccgttggaaaaaggacgggatggaatttatcccagccaat
tacccgggcctgtcgatgtctctgggttccggaaccttcatgacaacaggggcagggtca
gaacccatgagccaataccagggcaaatacagctgctacgctgataacgagctgggcacc
gctgtctctaacgaggtccagctcatcactgagaacaccccggccctccagaaagagaag
aaggtgaagaagaaggtggaggaaggagagagtgtggtactgaaatgtaaccctcccttc
agcactgtgcctcctgtcatccactggatggacaagagactccgtcacattgagctgaat
gatcgtgtgacccaaggccgggacgggaacctctacttctctcacgttacagccgacgac
aaccgtaacgactacacctgtaatgcccagtaccttagtgctcgcaccatcctctccaag
gaacccatcagcctcaccgtaaccacctctaactcagtggtgcggaaccgaagaccccaa
atgatgaggccctcaggggcccacagcacttaccacactctccggggccagagcctggag
ctagagtgcatcgtccagggcctccctacccctacagtccagtggatgaggaaggacggt
cagctgtccgagtctcgtacattcagagatctgtctgaccgcctgctgcgcttcagtaac
atctcagagagcgacgggggagaataccagtgttcagccaacaactcacagggcacggtc
acacacacctacaccgtcagtgtcgaagctgctccgtactggaccaaggagccagtgagc
cagctttatgccccaggagagacagtgagactggactgtcaggccgatggcattccctct
cctgctgtcacctggagcatgaatggaaatcccatcacaggtatagacttggatcccagg
cgtactgtgagagatggaactctgattctgagagatgtggtcttcactgatacagcagtc
taccagtgtcaggcccacaacaaacacggaaccatcctagtcaatacctacatctttgtc
atcgagctgccgcctcagatcctgagtgcggatggacagacatacaccgtcacagaggga
cagaaggctgttctacactgtcagacctttgggtctcccagacctaaagttacatgggag
gtggacaatggcgcgtctctactggctgaccccagggttaacctgctgaccaatggaagc
ctccagatcaccaacgtctcccacgacgacgagggcctgtacacctgctccatcagcaac
accaacatgtcaatcaacactgagctggaggtgctgaacaggacagtgatcctgtcttct
cccggggacctgcgtgttaggcccgggaagacggtcatatttacctgcctggctcaggtg
gactccaaactgacccccccacacatccaatggaggaggagtggacagaaactaatgcag
tcgtatgctgaggacaagtacacgtttgagggcccagacctgatcgtggccaacgtgcag
acagaggacgagggagtttacacctgtgaggtcatcactaacctggatatggctgaggcc
agcggatccatcacgctagtcgaccgtccagatccccccacccagctccaggtctctgac
cctaaagaccgcggagtgactctcagctggaccgctggagatgaccacaacagccctgtc
atagagtttcgggtggagtttaaggatcatgtttctaacgagtggagttgggaggagctg
aaaagtgttagtggaaccaaagagagtgtgaaccttgccctgcagccctatgtgtcctac
cgtttccgggtcatctccatcaacgacatcgggaagagtgatcccagcacgccttctgac
cttcacagcacgccacctcaagctccagacaacaaccctgaggatgtgaggagtgagtct
atagacccagacaccctggtcatcacatgggaggaaatggacaggcgagtgttcaacgga
ccggagttccactacaaggtgttctggaggagggtagtaggtgacggccccacctggcac
tctaatgtcaccactgagccaccgtacatcgttactgaagtgggcaacttctcagccttc
gagatcaaagtacaggctgtcaatcagaaaggggagggacctgagccagaccctgtcatt
ggctactctggagagaatgtccccctggaggctcctatggatgtgggtgttgtgctgctc
aacagtacagccatcagggtaacatgggcagcagtggacagagatactgtcagaggacac
ctactgggatacaagatccatctgaaaagattcggctccaggggccaccaccggggccgg
agggccagagagccagagagcagcatggtggtggagacaggggccaacgaggagaagagg
gtccttgggggccttagaccctactcccactacgccctcactgtcactgtgttcaacagc
aagggagaggggccccgctccgacccccccttgtccttcagtaccgacgagggagctcct
ggcccccccatgtctctccacctggaaagcccggcagagacagagatgactcttcactgg
accccccctgctcagcccaacggggttctcaaaggatacctgctgcagtatcaacagatc
gtggagagtgatgacagcccggtgcaggtggaaaccatagacgaccacacgctgaccaaa
ctgaccctgaagcagctggaccccaagagccgttaccgcttctacctgagggggcgcacc
tcggccggggatggcgaacccattacaagggagggcgccaccacgctggacggagctcct
ccgtccaacatcagcttgtctgtaggtgagaagtctgttaacctgagctgggtgccaggc
cagagacacaggagtgtgggcttccaggtccagtacctcaacaagaacagcggtggaaag
tggaagcagtctgagaagctgaactcgtcccagccattctaccagctgaagggtctaacc
ccaggatcacagtaccggctcagatttaccttcagcaacaacaccttctgggagacggag
atcaggaccgagggagcaggagtggtggatgtgcagacaggctttgctactcagggctgg
ttcattgggctcgtgagcgtcatcgtgctgttgctgctggtactgctcatcctctgcttc
atcaagaggagcaaggggggaaagtattcagtcaaggataaggaggagggtcaggtagac
tctgaggcgcgccctatgaaggatgaaacattcggagagtacagactttggaaaagatct
ctagaaagcgataacgaggagaagcggacagccagccagccatctctgtgtgatgagagc
aagctgtgtaccagtgaggacaacctggatggctacaacaacggcagcagtgctgtcacc
gaggtgaacatggaggattccctggtcagccagtacagccggcctagcgaacccaccccg
gacccgggtacactgcaggacagctcccccctcaaccccaccgccaccaccccaacaccc
accaacaacggcctgcccaactcggcggccatcttagattag
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