Salmo salar (Atlantic salmon): 106569246
Help
Entry
106569246 CDS
T04363
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00250
Alanine, aspartate and glutamate metabolism
sasa00410
beta-Alanine metabolism
sasa00430
Taurine and hypotaurine metabolism
sasa00650
Butanoate metabolism
sasa01100
Metabolic pathways
Module
sasa_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
106569246
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
106569246
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
106569246
00430 Taurine and hypotaurine metabolism
106569246
Enzymes [BR:
sasa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
106569246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SHMT
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
106569246
NCBI-ProteinID:
XP_013995902
UniProt:
A0A1S3LYB5
LinkDB
All DBs
Position
ssa14:complement(23967793..23977219)
Genome browser
AA seq
582 aa
AA seq
DB search
MEGQQWNSEILDKLHSQNSIICGLTMDYLQLPESIIENAKPGGQVLAESKQHRNSSDINP
PQTASDNTCSITKDFSCIYSKDLLPALSGEDTTKDFFQELVNILLSYVCKSFRRSSKVLD
FHHPHQLREGLEGFSLELPDQPENLEQLLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGL
AGEWLTSTANTNMFTYEVSPVFILMEEVLLRKMQEIVGWSEEEGDGVFCPGGTMSNLYSV
LLARYHFFPEVKTKGMTALPRLILFTSAHSHYSVKKSAAVLGIGSENVVVVKCNDRGKMI
PAELESSIITAKDQGCVPFYVNATAGTTVYGAFDPLNAIADICESHGLWLHVDAAWGGGL
LMSNLHRVKLQGIERAWSVTWNPHKMMGAPLQCSAILVKKRGLLKDCNQMCAEYLFQTDK
HYDTSYDTGDKTIQCGRHVDVFKLWLMWKAKGSEGFGSQVNKCLENAEHLFDKLNQRPDF
ELVFKSKPEHSNVCFWYIPPSLRNMPPGPERNRRLHEVAPKIKAKMMEQGMAMIGYQPLG
DKVNFFRCVFSNPATQTEDVDYLLEEIASLGHDICIRIETDL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcagcagtggaacagtgagatactggacaaacttcactcccagaactcaatc
atatgtgggctcactatggattatttgcagctgccagaaagcatcattgaaaatgctaaa
ccaggtgggcaggttttggcagagagtaaacagcacagaaactcctctgacatcaaccct
ccacagacagcaagtgataacacctgcagcataaccaaggacttcagttgcatctacagc
aaagatctactccctgctctcagtggtgaggacacaaccaaagatttcttccaagagctg
gtgaacattctcctcagctatgtctgcaagtcgttcagacggagctccaaagtcctggac
ttccaccaccctcaccaactcagagagggcctggagggcttcagtctggagctcccagac
cagcccgagaacctggaacaactcctggtcgactgcagggataccttgaagtatggagtc
aaaacaggtcacccacgcttcttcaatcagctgtcatcagggctggatgttatcggtttg
gccggggaatggctaacatctactgccaacacaaacatgtttacatatgaagtgtcccca
gtgttcattctgatggaggaggttctactgaggaagatgcaggagattgtgggttggtca
gaggaagagggggatggtgttttctgtccaggtgggaccatgtccaatctgtatagtgta
ctactggccagataccacttcttccctgaagtgaagaccaaagggatgactgctctgccc
aggctaatcctcttcacatcagcacatagtcattattcagtcaaaaaatctgcagcagtc
cttgggataggaagtgaaaatgttgtggtggtgaaatgtaatgaccggggaaagatgatc
cctgcagaattggagtcaagtatcattactgccaaagatcagggttgtgtcccattctac
gtcaatgccacagcaggcaccactgtgtacggagcctttgatcctctcaatgccatcgca
gacatctgtgagagccatggactctggctgcatgttgatgcagcctggggcggaggactg
ttgatgtccaacctgcaccgtgtgaaactacaagggattgaacgagcctggtctgtgact
tggaaccctcataaaatgatgggtgctccgctgcaatgctcagccatactggtgaagaaa
aggggcctcttgaaagactgcaatcagatgtgtgctgaataccttttccaaactgacaag
cactacgacacctcttatgacaccggagacaagaccattcagtgtggcaggcatgttgat
gtcttcaagctctggctcatgtggaaggccaagggttcagaaggctttggatcacaggtc
aataaatgtttggaaaatgctgagcacttgttcgacaaactcaatcaaagaccagacttt
gaactcgtcttcaaaagcaaacctgaacatagcaatgtgtgcttctggtacatcccacca
agtctgaggaacatgccaccaggtcctgagaggaacaggagactccatgaggtggcacca
aagatcaaagccaagatgatggagcaggggatggccatgattggttatcagccgcttgga
gacaaagttaacttcttccgatgtgtcttctccaacccagccacacagacagaggatgtg
gactacctcttggaggagatcgcttctcttggtcatgacatatgcatcaggattgaaacc
gatttatga
DBGET
integrated database retrieval system