Salmo salar (Atlantic salmon): 106569952
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Entry
106569952 CDS
T04363
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
KO
K08525
retinoid X receptor beta
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03320
PPAR signaling pathway
sasa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106569952
03320 PPAR signaling pathway
106569952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106569952
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106569952
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106569952
Nuclear receptors [BR:
sasa03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
106569952
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
106569952
NCBI-ProteinID:
XP_013997206
UniProt:
A0A1S3M2E4
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Position
ssa14:complement(59250891..59280126)
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AA seq
469 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLTPTAAAMTSLPPFTLAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLGGHSPGGPMLSQK
RLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRY
QKCLACGMKREVVQDERQRSVQEERQRNKERESEAESTSAVNEEMPVEKILEAEMAIEQK
TEVHADGSSEGSTPNDPVTNICQAADKQLFTLVEWAKRVPHFSELAMDDQVILLRAGWNE
LLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGVIFDRESAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSSSSEVELLREKVYASLESYCKHRYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattcccgcagcccagacagctcctctgtgtcctcccctccctcg
ggccagcgctcaccccccctgacccccacagctgctgccatgacgtctctgccgcccttc
accttggccgtcaacagccccatcagcagcatgggctcgcccttctctgtcatcagctcc
tctttggggtcgccatgtttgcccgggacaccctcggtgggctacggccccattagcagc
ccccagatcaactccacagtgtccatgtcgggactgcacgcggtcagcagctcggacgac
gtgaagcctccgttcgggctggggggccacagcccagggggccccatgctctcccagaag
cgcctgtgtgccatctgcggcgaccgctcctccggtaagcactacggagtgtacagctgc
gagggctgcaagggtttcttcaagcgcacggtgcgcaaggacctgagctacacctgccgg
gacaacaaggactgcctggtggacaagcgccagcgcaaccgctgccagtactgtcgctac
cagaagtgcctggcctgtggcatgaagagggaagtggtccaagatgaacgacagagatcc
gtgcaggaagagcgccagaggaacaaggagcgggagagtgaggcggagtcgaccagcgcc
gtcaacgaggagatgcccgtggaaaagatcctggaggccgagatggccatagagcagaag
acagaggtgcatgccgacgggagctctgagggcagcacgcccaacgacccggtcaccaac
atttgccaggctgcagacaagcagctgtttaccctggtggagtgggccaagagggtcccc
cacttctctgagctggccatggacgaccaggtcatcctgctacgtgccggttggaacgag
ctgctgattgcctccttctctcaccgctccatcagcgtgaaagatggcatcctactggcc
accggcctgcatgtgcacaggaacagcgcccacagcgctggcgtgggagtcatcttcgac
agggagagtgcgcacaatgcagaggttggggccatatttgacagagttctcactgagctg
gtcagtaagatgagagacatgcagatggacaagaccgagctcgggtgcctccgagccatc
atcctcttcaacccagatgccaagggcctttccagctccagtgaagtggaattgctgagg
gagaaggtgtacgcatcgctggagtcctattgtaaacatagataccccgaccagcagggc
aggttcgctaagctcctcctccggctgccagctctacgctccattggcctgaagtgcctg
gagcacctgttcttcttcaagctgattggcgacacccctatcgacacgttcctcatggag
atgctggaggcgccccaccagctgacctag
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