Salmo salar (Atlantic salmon): 106573448
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Entry
106573448 CDS
T04363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106573448
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106573448
04261 Adrenergic signaling in cardiomyocytes
106573448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106573448
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106573448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
DUF2201
Cache_3-Cache_2
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
106573448
NCBI-ProteinID:
XP_014003975
UniProt:
A0A1S3MLK7
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All DBs
Position
ssa16:complement(24431299..24591482)
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AA seq
1076 aa
AA seq
DB search
MDTYRPHAVLIVLLLSSDSCMPSQFPTQLMIKEWVDQIQLELVTLADTASAGKSLSQIFL
DNQNLYTVESNDAEELVARAARNIEQLLLKRAAALETLATAAENFQMEHQWEDEYADGDI
VYYNAKDNLEVNHTEGRKNRIRPAFKEDPLFKRFTSDNDTAVHIPTDIYDGSTIVLNELN
WTEALEDVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIKTSVSEMLETLSDDDYVNVVYFNTRVNNTACF
DHLVQANVRNKKILRDAIQNISAKGITNYTKGFEFAFEQLYATNITRANCNKIIMLFTDG
GEERASAILQEYNSDKKVRIFTFSVGQHNYDKGPVQWMACANKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADQLAKQVQWTNVYLDALELGLVITGTLPVFNKTKYKDELGIEIQNQL
ILGVMGIDVSLDDIKKLTPRYTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFL
DAELENDVKVQIRRIMIDGNPGEETIETLVKTQDERYIDIGVRTYTWAQVNGTDYSLALV
LPMYSEHYIQAKLGDTIRQAMAMDTLQVERFDELGHTFIAPREYCKGLKDKDNNTQFLLD
FNQFIDRNTVEEPCNMALVSRLLLDAGLTADLVKLWKEQTLRGVLARFVATDGGITRVYP
RSAGEEWTENAETYDSSFYKRTLDNDIYIFTAPYFNKSRESGYESGILVSKAVDLNIDRV
NLKPAVVGVKLNVSAWMNSFMNATIKVNCKDEICGCLKNDKHVDCVILDDGGFLLMSNQE
EYITQIGQFFGEVDPVVMISLVNTSLYSFNKTYDYQSVCNPERDCKAAAGPRSVYVPTIA
DMLSISWWASTGAWSIMQQLFYSLIFPRFLEAVDSDDDMSANMFKESCITEQTQYFFDNE
ERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKTTCLSCDPRPLRQAEQPSQGPDRCE
LAQNPRYRKGPDVCFDNNLDEDDSDCGGGTSLSPSLWPMLGLQLLLLWLLTGPRHS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggacacctacagaccacacgccgtgttgattgtactgttgttatcgtcggatagttgt
atgccgtcgcagtttccaacacaactcatgataaaggaatgggtggatcagatacagcta
gagctggtgacactggcagacaccgccagtgccgggaagagcctctcacagatcttcctg
gacaaccagaacctgtacacagtagagtcgaacgatgcagaggaactagtggctagggca
gccaggaacatagaacagcttttactgaagagggctgctgctctggaaactctggccacg
gctgctgagaactttcagatggaacaccagtgggaggatgagtatgcggatggtgacatt
gtttactacaatgcaaaggacaatttggaggtgaatcacacagagggtaggaagaaccgg
atcaggccagcctttaaggaggacccgttgtttaaacgcttcacctctgataacgacact
gctgtacacatccctactgacatctacgatggctccaccatcgtgctgaatgagttgaac
tggacggaggcgctggaggatgtgtttaagaagaacagagaggatgaccctactctgctc
tggcaggtgtttggtagtgctactggactggcccgatactacccagcctctccatggatg
gatgctcggaagacccccagtaagattgacctatacgatgtacgcaggaggccctggtac
attcagggagctgcctctcccaaggacatgctgatcctagtggacgcgagtggcagtgtg
tctggtctgactctgaagctgataaagacctcagtcagtgagatgctggagactctgtct
gatgatgactatgtcaacgtagtttatttcaacaccagggtgaataacacagcgtgtttt
gaccacctggtccaggccaacgtgaggaataagaagatcctgagggatgcgattcagaac
atctctgctaaaggcatcaccaactacaccaagggatttgagtttgccttcgaacagctc
tatgcaactaacatcaccagagccaactgtaacaagatcatcatgctgttcactgacgga
ggagaggagagagcatcggccatacttcaggaatacaactctgacaagaaggtgcgtatc
ttcaccttctcagtaggtcagcacaactatgataaaggtccagtccagtggatggcctgc
gctaataaaggatacttctatgagattccctcaattggagccatacgcatcaacactcaa
gagtacctggatgtactgggcagacccatggttttagctgaccagctggccaagcaggtc
cagtggactaatgtctacctcgacgctctggagctaggtctggtcatcacaggaacccta
cctgtcttcaacaagaccaagtataaagatgaattgggcatagagattcagaaccagttg
atcctaggggtgatggggattgacgtgtcactagatgacatcaagaagctcacaccgcgc
tacactattggacctaatggatattattttgccatcgaccccaacggatatgtgctgcta
caccccaacctccaacctaagaaccctaaattccaggagcctgtcactctggacttcctc
gatgcggaactggagaacgacgtcaaagtccagatcaggagaattatgatagatgggaac
ccaggtgaagagaccatagagactctggttaaaactcaggatgagagatacatcgacata
ggagtaaggacgtacacctgggctcaggtcaatggaacagactatagcttggccctagtc
ctgccaatgtacagtgaacactacatacaggccaaactgggagacaccatcagacaggct
atggccatggacactctgcaggtggagaggtttgatgagttggggcacaccttcattgcc
cccagggagtactgcaaaggcctgaaggacaaggacaacaacacccagttcctcctagac
ttcaaccagttcattgacaggaacacagtggaagagccttgtaatatggctctggtcagt
aggctgctgttggatgctgggttgacagctgatctggtcaaactgtggaaggagcagaca
ttgcgcggagtcctggccaggtttgtagccactgacggagggatcactagagtctatccc
agaagtgctggggaggagtggacagagaatgccgagacctatgactcaagtttctacaag
aggactctggataacgacatctatattttcactgctccatatttcaacaagagcagggag
tcaggctatgagtcaggtattctggtgagcaaggctgtagatctcaacatagacagagtc
aacctcaaaccagcggtggtgggagtgaaactgaacgtctctgcctggatgaacagcttc
atgaacgccaccattaaagtcaactgcaaggatgaaatctgtggctgtctgaagaatgat
aagcatgttgactgtgtcatcttggatgatggaggctttctgctgatgtccaatcaggag
gagtatatcacacagataggtcagttctttggggaggtggacccagtcgtgatgatcagt
ctggtcaacacgtctctgtactccttcaacaagacctacgactaccagtcagtctgcaac
cctgagagagactgcaaggctgctgcagggccacgatctgtctacgtgcccactatagca
gacatgctgagtataagctggtgggcctccacaggtgcctggtcgataatgcagcagctc
ttctacagtctcatattcccaaggttcctagaggcagtggactcagatgatgacatgtct
gctaacatgtttaaggagagttgtatcacagagcagactcagtatttctttgacaacgaa
gagagatcctactcgggagtcctcgactgtggaaactgctccaggatgtatcgagctgag
aagctgcccaacactaacctggtgtttctgatcactgatgccaagaccacctgtctgtcc
tgtgaccccagaccactacgacaggcagagcaaccatcccaaggtccagatcgctgtgag
ctagctcagaaccccaggtacaggaaaggacctgacgtgtgttttgacaacaacttagac
gaggatgattctgactgtgggggcgggacctctctaagcccctccctctggcccatgttg
ggactccaactactgctgctgtggctcctcactggcccccgacactcatga
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