Salmo salar (Atlantic salmon): 106578116
Help
Entry
106578116 CDS
T04363
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106578116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106578116
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106578116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_jaz
Zn-ribbon_8
zf-met
zf-C2H2_6
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
106578116
NCBI-ProteinID:
XP_014012191
UniProt:
A0A1S3NAQ6
LinkDB
All DBs
Position
ssa18:67279670..67312726
Genome browser
AA seq
918 aa
AA seq
DB search
MSKLQSFRVFLNERLTAAAVEIFGEVEKTVVKYQEENDRLRRLLEITSEVQLCRTDSLQL
SVSEEEVPPEQQHCEQEWSPSLGQEDPETTQIKEEQEEVRTSQEEEQLQRLQPDVIESVF
TPSCVKSECDQMDPHQEAILAEHPTLSPLKTSKLQSFRVLLNECLTASAAVEILGAVEET
VAEYQEENDLLRRLLGRTPEIKLRRIESLQLSVSEEEFPPEQQHCEQEWSPSLGQEDPEP
TQIKEEQEEVRTSQQEEQLQGLVDTKDSIFTPSCVKSECDQMDPHQEAILAEHPTLSPLK
TSKLQSFRVLLNECLTASAAVEILGAVEETVAEYQEENDLLWRLLGRTPEIKLRRIDSLQ
LSVSEEEVPLEQQHCEQEWSPSLGQEDPETIQIKEEQEEVRTSQQEEQLQGLFVTKDSIF
TLSCVKSECDQEDPLQSLTLPQTQTVENRQNGSKPVNLTPFVTVTHIKGLNIPCDPPDNQ
NNASSHSSAVSSDTVGLNSSPPLDPSPLLEKHSSKPSTTSRRTHHCHDCGETFALKDDLQ
RHMTLTKKRPSECCFCSKHYNSTCKLKAHVRLCHGGKPYICPVCGKTFKYKGGLPRHMRI
HKGEKPFICGDCGKSFNQKGNLTEHVLIHTGEKPFSCGDCGKSFGLKRYLTMHKLTHTGE
KPFSCGDCGKSFNRKAVLTMHIRTHTGEKPFICGDCGKSFRHKGCLKIHVLTHTAEKRFS
CGDCGKSFNKRGNLKVHIRTHTGEKSFSCGDCGKSFNTRGNLTRHIRTHTRDNSFRCGDC
GESFNEKGHLNEHIRTHTGEKRFICGNCGKSFKHKGCLKIHILSHTGEKPYRCGDCGESF
NEKGHLNEHIQTHTGENPYSCGDCGESFNQKVDLKRNIRIHTGEKSHGCSVCGKRFTQKS
HLLRHVDKIHKGRIQDRN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaactacagtcgtttcgtgtgtttttaaatgagcgtttaacggcggctgctgtg
gagattttcggggaagttgagaaaacggtagtgaaataccaggaggagaatgatcggcta
cggagattgctggagatcacatcagaggttcaactatgtagaacagactccctgcagctc
tctgtctctgaagaggaggttccccctgagcagcagcactgtgagcaggagtggagcccc
agtctgggacaggaggacccagagaccacacagattaaagaggaacaggaggaagtcagg
accagtcaggaggaagagcagcttcaacgtctgcagcctgatgtcatagagtccgtattc
actccttcctgtgtgaaaagtgaatgtgatcagatggacccacatcaagaagccatacta
gctgaacacccaactctcagtccactgaaaacgtctaaactacagtcgtttcgtgtgttg
ttaaatgaatgtttaacagcatctgctgctgtggagattcttggtgcggttgaggaaact
gtagcagagtaccaggaagagaatgatctgctacggagactgctggggaggacaccagag
ataaaactacgtagaatagaatccctgcaactctctgtctctgaagaggagtttccccct
gagcagcagcactgtgagcaggagtggagccccagtctggggcaggaggacccagagccc
acacagattaaagaggaacaggaggaagtcaggaccagtcagcaggaagagcagcttcaa
gggctcgttgataccaaagactccatattcactccttcctgtgtgaaaagtgaatgtgat
cagatggacccacatcaagaagccatactagctgaacacccaactctcagtccactgaaa
acgtctaaactacagtcgtttcgtgtgttgttaaatgaatgtttaacagcatctgctgct
gtggagattcttggtgcggttgaggaaactgtagcagagtaccaggaagagaatgatctg
ctatggagactgctggggaggacaccagagataaaactacgtagaatagactccctgcag
ctctctgtctctgaagaggaggttccccttgagcagcagcactgtgagcaggagtggagc
cccagtctgggacaggaggacccagagaccatacagattaaagaggaacaggaggaagtc
aggaccagtcagcaggaagagcagcttcaagggctctttgttaccaaagactccatattc
actctttcctgtgtgaaaagtgaatgtgatcaggaggacccacttcagtccttgactctt
ccccaaacccagactgtggagaacagacagaatggctctaaaccagtgaatctcacacct
tttgtcactgtgacccacattaagggtctcaacattccctgtgaccctccagataatcaa
aacaatgcctccagccacagctcagctgtaagcagtgacacagtaggacttaatagcagc
ccaccattggatcccagtccactattggagaaacacagttccaaacccagcaccacatct
agaagaactcaccactgccatgactgtggtgaaacatttgctctgaaagatgacctgcaa
aggcatatgactctcaccaagaagagacccagtgaatgctgcttctgcagtaaacactac
aactccacctgtaaactgaaggcccatgtccgactctgtcacggtgggaaaccctatatc
tgccccgtttgtggaaagaccttcaaatacaaaggaggtctccccaggcacatgaggatt
cacaaaggagagaaaccttttatctgtggtgactgtgggaaaagcttcaatcagaagggg
aacctaactgaacatgtattgattcacacaggagagaaaccatttagctgtggtgactgt
gggaaaagctttgggctcaagcggtacctaaccatgcataaactgactcacacaggagag
aaaccatttagctgtggagactgcgggaaaagctttaatcgcaaggcggtcttaactatg
catatacggactcacacaggagagaaaccatttatctgtggcgactgtgggaaaagcttc
cgccataaggggtgccttaagatacatgtactgactcacacagcagagaaacgatttagc
tgtggtgactgtgggaaaagcttcaataagagggggaacctaaaagtgcatatacgtact
cacactggagagaaatcttttagctgtggagactgtgggaaaagcttcaatacgaggggg
aacttaaccaggcatatacggactcacaccagagataattcctttcgctgtggtgactgt
ggggaaagcttcaatgagaaggggcacctaaatgaacatatacgaactcacacaggagag
aaacgatttatctgtggtaactgtgggaaaagctttaagcataagggatgccttaaaata
catatattgtctcacacaggagagaaaccatataggtgtggtgactgtggcgaaagcttc
aatgagaaggggcacctaaatgaacatatacagactcacacaggagagaacccttatagc
tgtggtgactgtggggaaagcttcaatcagaaggtggacctaaagaggaatatacggatt
cacacaggagagaaatcacatggctgctcagtctgtggtaaaaggttcactcagaagtct
catctgctgaggcatgtggataaaatccacaaaggaagaatacaggacagaaactga
DBGET
integrated database retrieval system
