Salmo salar (Atlantic salmon): 106580944
Help
Entry
106580944 CDS
T04363
Name
(RefSeq) intraflagellar transport protein 80 homolog
KO
K19678
intraflagellar transport protein 80
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106580944
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
106580944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
106580944
NCBI-ProteinID:
XP_014018011
UniProt:
A0A1S3NS23
LinkDB
All DBs
Position
ssa20:complement(53175458..53187053)
Genome browser
AA seq
460 aa
AA seq
DB search
MQVRNVVNDAEDVLEFRDRVIKASLAHGHLVVTTSLQCYVYSATNWNTPLIFDLKEGTVS
LIVQAEKHFLLVDGTGLYVFSYEGRLISTPRFPGMRTDILNAQSVSLSNDTIAIRDKSDE
KVIFLFDALTGKALGDGKPLTHKMEVVEIALDQCGPSSDRKIAVIDKNRDLYLTAVHRLY
REHNICKIGTMVHTMSWNDSSNILCGIQDTQFTVWHYPSAVFTDKDLLPKTLYTKDASEF
SRAPHILNYVGTQVTVRRGDGSLVYSNVSPYPALLHEYSASSRWEDALRLCRFAKDQSLW
ACLAGMAMANRELTTAEVAYAAIGEVDKVQYINSIKDLPSKESSVAHMLLFSGHVQEAEA
TLLQAGLVYQTIQVHINLYNWDRALELAVKHKTHVDTVLAYRLKFLQDFSKKETNKRFMQ
YAEGVEVDWEKIQAKIEMELVKEREKAATTSVRSSLASRR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaggaacgtggtgaatgatgcggaggatgttctggagttcagggaccgggtc
atcaaagcctctctggcccacggtcacctagtggtcaccacctctctccagtgctacgtc
tacagtgctacgaactggaacacccctctcatctttgacctgaaggaggggactgtcagc
ctcattgtacaggctgagaaacacttcctgttggtggatgggacggggctgtatgtgttc
tcctacgagggccgtctcatctccacgcccagattccccggcatgagaacggacatcctc
aacgcccagtccgtctcccttagcaacgacaccatcgccatccgggacaagagcgatgag
aaggtcatctttctgtttgatgccctgacggggaaagccctgggtgacgggaagcccctg
actcacaagatggaggtggtggagatagctctggaccagtgtggcccgtccagcgatagg
aagatcgcggtcatagacaagaaccgtgacctgtacctgaccgctgtccatcgcctctac
agagaacacaacatctgcaagataggtactatggtccacactatgtcctggaacgactcc
tctaacatcctgtgtggtattcaggacacacagttcaccgtgtggcactatcccagtgct
gtcttcactgacaaggacctgctgcctaaaacactgtacacgaaggacgccagtgagttc
agccgggcgccccacatcctgaactacgtggggacccaggtgacggtgcgtcgcggtgac
ggctcgttggtgtacagcaacgtgtctccctaccctgccctgctgcacgagtacagcgcc
tcctctcgctgggaggacgctctgcgcctctgccgctttgccaaggaccagtcactgtgg
gcgtgtctcgctggcatggcaatggccaatagggagttgacgacagcagaggtggcctac
gctgccattggagaggtggataaggtgcagtatattaactctataaaggatctgccgtct
aaggaatcttcagtggcccacatgttactgttcagtggtcatgtccaggaggctgaggcc
actctgctacaggctggcctggtctaccaaaccatacaggtccacatcaacctctacaac
tgggacagggcgttggagctggcagtaaaacataagacccatgtggacacagtgctggcc
tacagactcaagttcctgcaggactttagcaagaaagagaccaacaagaggttcatgcag
tacgctgaaggggtggaggtggactgggagaagatccaggcaaaaatagagatggagctg
gttaaggagagagagaaggctgccaccacctctgtcaggagcagcctggcctcccgacgc
tga
DBGET
integrated database retrieval system
