Salmo salar (Atlantic salmon): 106585848
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Entry
106585848 CDS
T04363
Symbol
dmxl1
Name
(RefSeq) Dmx like 1
KO
K24155
rabconnectin-3a
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106585848 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106585848 (dmxl1)
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106585848 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
106585848 (dmxl1)
RAVE complex
106585848 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
106585848
NCBI-ProteinID:
XP_014028012
UniProt:
A0A1S3PK17
LinkDB
All DBs
Position
ssa24:39720564..39782374
Genome browser
AA seq
3057 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSINNQPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDSSLQGGQVAASYGSIVCVFEPVQLMNQKDRTSAELSYQWQKSGQFVLQSIVRNLAW
DPTGTRLLTGSASLQLWSNISDGFDEEGEQTDMTIGDPQCPWRCIWHCKTASPIQLMKFS
PDGEFFATAGQDDCLVKVWYGTSKWQSGVTKLFTPPEHNAQGELDFSFVYLAHPRSVTGF
SWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPSDSLLSGHTLSHVNNNGQSSDSLK
SSGSKKTPSRIKTQDRNPLELNLQESWRAPLRGVAQPSLTGRLPTQQNSHHNHKTNSVPH
ANALCHFHIAASINPATDIPLLPSITSLCGGDDEEPGGPFTVHWLNNKELLLTLAMEVFL
QQLRGSVEQNNSEHSQEEPDYEEVEEASRRAAERGPDVASTQLPAAAVEHQVEVLLEDWN
RGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLSRSVV
MYACNKNVDLAIQHGRQRPAGLPHSSSVLIPYGQSKATSYSSSLRLSIFTPNVLMISTHS
DGSLNQWAVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTP
DVDSVPAPSTTLSQPLGGGPSRVSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELA
RINSLHSSAFSNVAWLPTLIPSNCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSEL
SNPDISKYVGKVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSERRDA
TQEAPATETTSSQPGFSARFFLVVVEFTQTGRSFLHMWHLQLAAGQITMDETGAPPEKEN
VTLSPMNSSFSFETFSSPSAQKNKPCTSNLQSASRLILATHRLYSQELALPDGVEVISVT
PSAGHLSASSLQPAGGAPYLLATSCSDGKVRFWRCRVSAVEPDTKELTYTWEEWPLLVEE
GLGNSSAVTVSGRPVTVSCCHTSRIAVAYRHNPSPHLSPNPNHLSPNPNHLSPNPNHLSP
NPNHLSPNHLSPNPNHQSPNPQQGVREPLVHVGLFQCESTGGSHWVLEQTLVLDASTPTG
NNNMESGAKGLNVENNNLDIYLPNDACLGSSGKSLVHLDWVSREDGSHILTVGIGSKLYM
YGLLSGKPPELGLSEGPREQSSSRLVLLRSVDLVSSVEGSLPIPVSLSWVRDGILVVGMD
CEMHVYSQWQPPAKSTALNTMTTDMGSVSSLLAAMKQSHEEGLNPSPPKKSLTRSMTSLA
QKLSGKRTVYDLPAEMEDYGLFEAAHHLFPTLPQYHPVQLLELMDLGKVRRAKAILSHLV
KCIAGEIVALKDNGTNQDKRLRSRTISAGGSTSRDPKLFSKGESSDYTEIDSIPPLPLYA
LLAADEDCSPKPKDKVASLSGDSGHGSSQTDAYDELFQSSGVGVDDLEHMDSDQEDGGAK
VIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIATTSTDIRESQSR
GKGGETLDECGLKFLLAVRLHSFLLTTLPPAHRAQLLRQGLSTCHYAWAFHSEAEDELLH
MLPALQKGDPTWPELRAMGMGWWLRSTNKLRRCIEKVAKASFQRQNDPLDAAIFYLAMKK
KAVVWGLYRSQKNAKMTTFFSNNFGEERWRRAALKNAFSLLGKQRFQHSAAFFLLAGSLK
DAVEVCLEKMQDLQLALVISRLYESEFETSSTYKRILQRHVLGQDRQLPAHQDPFLRSTA
YWVLEDYSRALDTLLEQPAAPNLASPTQAGHTTQPGSTSSTSLCSPEVFNFYTYLRTHPL
LLRRHFGSSEKTRVGLTAEGRMANSISLVERRLFFTAAYAHLQAGCPMLALEVLSKMPKV
VKRSKLHQDDTTNPDLSETKKEQASDLDWSQPALNGFESVSDSLSNSQSDSVLSFDWGQP
SVSVQDEALELKWDSDKEEEEDDDDEPQGLAMKSADNTSSVFQDATSPLTETLLDEGDVL
MPSEDILAAQLKFSACLKILTTELRTLSTGYELDGGKLRYQLCQWLEREVVALQRCCSYK
PCLPELALGMAGPGGEEAAQAQPGEAQRTRRHWLQSNQPLLRMFLSYCSLHGSHGGGLAS
VRMELILLLQESQQDDGVQSAVAPYLHHASIPLLLACTASAKTVVANPIVHLTNLTHDIL
HTINALDSPPHPDVVNNEIYVMHTLAASLSACIYQCLCDGHNHSHVNQFTGIVYQSILSF
QHHPVRTVSMEETVLPNTHPAQWPGISTLIRLLNSAGEESQPGLAVLLCEILTAVFLSLF
VHGLATHSSNELFRIVAHPLNSKLWVAVFGGGARTPITEKPSQTKSPPAASEEFDRKPRR
FKLLSSSSSRSASREGPESPSPTSPVVEQETSIFKEHFVPPELSIWDYFIAKPFLPPSES
RVEYDSEESQGSQDEDDDEDEFGDIDPNSPSQEHSNPNSYSWCLMRLAMVQLVLGNLKSF
YPMAGHDLLDLPVGSPLCHAVLKTLQRWEQVLLKRLEIFGGPPSKYISTHPLDETAASGP
AILRHKALFEPSNTPFRSSHHSALPVKRLWQYLVKQEEVQETFIRNIFTKKRDQNESVED
HNENDKCSGMEEPSCNQSEADLGYPGGKARIIHKDSDIITAFAINKANRNCLVMASTHDI
QELDVSSILATQILTWIDDDTEAEAKGDDFLVIQARDDFNTLHGTTPYTHSSLGTPINMP
WLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSP
GNSRVTRIRFNHQGNKFGIVDADGALRLWQTNTTGNTPKPYLTLQCHNKTAHDFVFVGSS
SLIATAGLSTDNRNVCLWDTLVNPMNSLVHAFSCHESGATVLSLAARQQLLITGGRKGWI
SVLELPHRHQRQSFQAHDSPVKALAVDPTEGSFISGSAEGNIKVWSLSTQCLLHQFPNEH
ARQSLFRNLGTGVMQIEVGPANHIFSCGADGTMKMRILPDRFSVNNGNLKNDVKFII
NT seq
9174 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaccaagtccttactggggctgtcaacccaggggacaattgtttttctgta
ggtagcataaacaaccaaccattcacggcatatgcctctggctgtgacgttgtgattttg
ggcagtgactttgaaaggctacagatcatcccaggagcaaagcatgggaacatccaggtg
ggctgtgtggacagctcactacagggaggccaggttgcagcttcctatggaagtattgtc
tgtgtctttgagccagttcagctcatgaaccagaaggacaggacatcagcagaactgagc
taccagtggcagaagagtggacagtttgttttgcagtccatagtgcgtaacctggcctgg
gaccccacaggcactcgtctcttaactgggtccgctagcctccagctgtggtccaatatc
agcgatggttttgatgaggaaggggaacagacagacatgaccattggtgaccctcagtgt
ccctggaggtgtatctggcactgcaaaaccgcctccccaattcagctcatgaagttctct
ccagatggagaattctttgctactgccggacaggacgactgtctggtcaaagtgtggtac
ggcaccagcaaatggcagtctggcgtgaccaagctattcaccccaccggagcacaacgct
cagggcgagctcgacttctcttttgtctacctggcacacccacgctctgtaacgggcttc
tcctggaggaagaccagcaagtacatgccacggggttcagtgtgcaatgttctactgaca
tgctgtaaggacagtgtgtgtcgcctgtgggccgagaccctgcttcccagtgacagcttg
ctgtccggacacacgctcagtcacgttaataataacggacagagcagcgactcactgaaa
tcgtcaggcagcaagaagactccctctcgtatcaaaacgcaggacaggaatcccctggag
ttgaatctgcaggagtcgtggagagcccccttgagaggtgtggcccagccctcactgacc
ggccgcctcccgacccagcagaacagtcaccacaaccacaagaccaacagcgtgcctcat
gccaacgctctctgccacttccacatcgctgccagtatcaaccctgccacagatatcccc
ctgctgccctctatcacgtcgctgtgtgggggagatgacgaggagcctggcgggcccttc
accgtgcactggctcaacaacaaggagctgcttctcaccctggccatggaggtgttcctg
cagcagctcagaggcagtgtggagcagaacaactcggaacactcccaggaggagcctgac
tatgaggaggtagaggaggcttctaggcgagcggcagagcgaggacccgacgtggcgtcc
acccagctgcctgctgcagcggtggagcaccaggtagaggtgctactggaggactggaac
agaggggcagacatgctgttcagtatccaccccatggatggctctctgctggtgtggcat
gtggactggctggatgaatatcagcccggcatgttccggcaggtccaggtgtcctttgtg
tcccggattcctgtggccttccccacgggcgacgccaactccctgagccgcagcgtggtc
atgtacgcctgtaacaagaacgtggacctagccatccaacatggccgccagcggcctgcc
ggcctaccacattcctcgtcggtgctgattccctacggccagagcaaggcgacctcctac
tccagcagcctgcgcctcagcatcttcacccccaacgtgctcatgatctccacgcactcc
gatggctccctcaaccaatgggcggtcagcttcgcagaggagtcggccttctccactgtg
ctcagcgtgtcccacaagtcacgctactgcggccatcgcttccacctcaacgacctggcc
tgccactccctgctgcccctgttgctcaccacctcacaccacaatgccctgcgcaccccc
gacgtggacagtgtccccgccccctcgaccaccctttctcaacccctcgggggcgggccc
agccgggtgtccctgggcgctgtgtcgcaggaccccaacgccatttacagcgagctcatt
ctgtggagggtggatccagtgggaccgctgtccttctctggaggggtgtctgagctggcc
aggatcaactctctccactcctccgccttctccaatgtagcctggctgcccacactcatc
cccagcaactgccttggtgtctactgcaactctcccagtgcctgctttgtggccagtgac
ggtcactcgctgaggctttaccaggctgttattgaagccaagaaactactcagtgagctc
tccaacccagatatttcaaaatatgtcggcaaagtttttaacatcatcagccagcaatcg
actgctaaaccaggttgtatcatcgagctagatgccattactgacttccaggggaaggag
actcagctgctgcatgtgtttgaagaggatctgattctgggcagtgagcggagagatgcc
actcaggaagctcccgctacagagactacctccagccagccaggcttctccgcccgcttc
ttcctggtggtggtagagtttacccagactggcaggtctttcctgcatatgtggcacctg
caactggcagctggccaaatcactatggacgagaccggcgctccgcctgaaaaggagaac
gtgactttgtcaccaatgaacagctcctttagctttgagacgttcagctccccctcggcc
cagaagaacaagccttgcacgtccaacctgcagagtgccagtcgcctcatcctggccact
cacaggttgtacagccaggagctagctcttccagacggcgttgaggtgatcagtgtcaca
ccctcagcaggtcatctgagcgcgtcctccctgcagccggcaggtggcgctccctatctc
ctggccacttcctgttcagacgggaaggtgaggttctggaggtgcagggtgtctgcagtg
gagccagacaccaaggagctgacatacacctgggaggaatggcctctattggtggaggag
gggctgggcaacagcagtgccgtgaccgtgtcaggcagaccagtcacggtcagctgttgt
cacaccagccgcattgcagtggcctaccgacacaaccctagccctcacctgagccctaac
cctaaccacctgagccctaaccctaaccacctgagccctaaccctaaccacctgagccct
aaccctaaccacctgagccctaaccacctgagccctaaccctaaccaccaaagccctaac
cctcagcagggtgtcagggaaccactggtccatgtagggttattccagtgtgagtccaca
ggtggctcccactgggtgctagagcagaccctcgtcctggatgcctccactcccactggt
aacaataacatggagagtggcgccaagggcctgaatgtggagaataataacctggacatc
tatctgcccaatgacgcctgcctggggtcctctggtaagagtctggtccacctggactgg
gtctccagggaggacggctcccacattcttactgtggggattggttccaaactctacatg
tacggcctgctctctggcaaacctcctgaactgggcctgtctgagggccccagggagcag
agctcttcccgcctggtcctcctgcgctccgtggacctggtctcctccgtggaaggctcc
ttgcccatccccgtctccctgtcctgggtgagagacggcatcctggtggtgggcatggac
tgtgagatgcacgtgtactcccagtggcagcccccggccaagtccacggccttgaacacc
atgaccacagacatgggcagcgtgtcgtccctcctggctgcaatgaaacagagccatgag
gagggcctgaacccctctcctcccaagaagagcttgaccaggtccatgaccagcctggcc
cagaagctgagtgggaagaggacagtgtacgacctgcctgcggagatggaggactatggg
ctgtttgaggcggcacaccacctgttccccacgctgccccagtaccacccggtacagctg
ctggagctcatggacctggggaaggtccggcgggccaaggccatcctctcccacctcgtc
aaatgcattgccggggagatcgtggccctcaaagacaacggcaccaaccaagacaagcgt
ctccgctcgcgcaccatcagcgccggcggcagcacctccagagaccccaagctcttcagc
aagggtgagagctcggactacacagagattgactccatccctcccctgcccctgtacgcg
ctgctggcggccgacgaggactgctcccccaagcccaaggacaaggtggccagtctgagt
ggagacagtggccatgggtccagtcagacggacgcctacgatgagctcttccagagcagc
ggggtgggtgtggacgacctggagcatatggacagcgaccaagaggacggcggtgctaag
gtcatagacctgtctcaatatagccccaccttctttgggccagagcacgcccaggttctg
tccagccacctgctccactccagcctgccgggcctgacccgcatggagcagatgtccctc
atggccctggctgacaccatcgccaccacaagcactgacatccgggagagccagagcagg
ggtaaaggtggagagactttggatgagtgcggtctgaagttcctgttggctgtgaggctc
cattcgttcctgctgaccaccctgcctcctgcccatcgcgcccagctgcttcgccaaggt
ctgtccacctgtcactacgcctgggccttccactccgaggccgaggacgagctgctccac
atgttacctgccttgcagaaaggagaccccacctggcccgagctccgcgccatgggcatg
ggctggtggctcaggagcaccaataaactccggaggtgtattgaaaaagtcgcaaaagcg
tcttttcaaaggcagaacgatcctctggacgccgccatcttctatctcgctatgaaaaag
aaagcagtggtctggggactgtacaggtctcagaagaatgccaaaatgacaacgttcttc
agcaacaacttcggtgaggaaaggtggaggagggctgccttgaagaacgccttttctctg
ctggggaagcagcgcttccagcactctgcagccttctttcttttggcaggctccctcaag
gacgctgtggaggtttgcctggagaagatgcaggacctgcagctggccctggtgatctcc
cggctctatgagtccgagtttgagacgtcctccacctacaaacgcatcctgcagaggcac
gtgctgggccaagaccgccagctccccgcccaccaggaccccttcctgcgcagcacggcc
tactgggtactggaggactacagccgggccctggatactctgctggagcagcctgctgcc
ccaaacctagcgtcccccactcaggctggccacacaactcaaccaggtagtacctcgtcc
acgtccctctgtagcccggaggtcttcaacttctacacctacctccgcacacatccctta
ctgctgcgccgccattttggctcgtctgagaagaccagggtgggtctgacagcggagggt
cgcatggcaaactcaatcagcctggtggagaggaggctgttcttcaccgcagcctacgct
cacctgcaggccggctgccccatgctggccctggaggtcctctccaaaatgcccaaagtt
gtcaaaagatccaagctccaccaagacgataccaccaaccccgacctgagcgagacgaaa
aaggaacaggcgtcagatttggactggtctcagcccgcgttgaacggcttcgagtctgtg
tcagacagcttgtccaatagccaatcggactctgtgctgagttttgactggggccagccc
tctgtgtcggttcaggatgaagccctggagttgaaatgggacagcgacaaggaggaggag
gaggacgacgacgacgaaccacagggcttggccatgaagagtgccgacaacaccagtagc
gtctttcaagacgccacctctccattgacggagacgctgctggacgagggtgacgtcctc
atgccctctgaggacatcctggccgctcaactcaaattcagcgcctgcctgaagatcctg
accacggagctgcggaccctgtccacgggttacgagctggacggggggaagctacgctac
cagctgtgccagtggctggagagggaggtggtggccctgcagaggtgttgcagctacaag
ccctgcctgccggagctggccctgggaatggcagggccaggtggagaggaggcggcccag
gcccagcctggtgaggcccagcgcacccgcagacactggctccagagcaaccagcctctc
ctgcgcatgttcctcagctactgcagcttgcacggctcccacggaggaggcctggcctcg
gtgcgcatggaactcatcctgctgcttcaggagtcccaacaggatgacggtgtccagtca
gccgtcgccccctacctgcaccacgcctccattcctctcctgctggcctgcactgccagt
gccaagacagtggtggccaaccccattgtccatctgaccaacctcacccacgacatcctg
cacaccatcaacgcactggactccccgccacacccagacgtcgtcaacaacgagatctat
gtgatgcacacactggcagcctcgctgtccgcctgcatataccagtgtctctgcgacggc
cacaaccacagccatgtgaaccagttcactgggatagtgtaccagagtatcctctccttc
cagcaccacccggtacgcaccgtgagcatggaggagactgtactacccaacacccaccca
gcacagtggccaggtatcagtaccctgatccgcctgttgaactctgctggtgaggagagc
cagccaggcctggccgtgttgctgtgtgagatcctgacggccgtcttcctcagcctgttt
gtgcacggcctggccacccactccagcaacgagctgttccgcatcgtggcccacccgctc
aacagcaagctgtgggtggctgtgttcggagggggggcgcgtacccccatcacagagaag
cccagtcagaccaagtcacctccagcagccagtgaggagttcgataggaagcccaggcgc
ttcaagctgctgtcgtcgtcgtcgtcacgcagtgcctccagagaggggccagagagcccc
agcccaaccagccctgtggtggagcaagagacctccatcttcaaagagcactttgtcccc
ccggagctcagcatctgggactactttatcgcaaagccttttctccctccgtcagagagc
agggtggagtacgactcggaggagagccaaggcagtcaggacgaggatgatgatgaagac
gagtttggagacattgaccccaactctcctagccaagaacattccaatcccaactcctac
agttggtgtctgatgcgcctggccatggtccagctggtcctaggaaacctgaagtcattc
taccccatggcaggacacgacctactagatctacctgtgggctctcctctgtgtcacgcg
gtgctgaagaccctccagcgctgggagcaggtgttgctgaagaggctggagatcttcggg
gggccgccctccaagtacatctccacgcaccctctggacgagacggctgcctcaggccct
gccatcctcagacacaaagccctgtttgagccctccaacacacctttcaggtccagtcac
cactctgccctgcctgtgaagaggctgtggcagtacctggtcaaacaggaagaggtgcag
gaaacgttcatccgcaatattttcaccaaaaaacgagaccaaaacgagtcggttgaggac
cacaatgaaaatgacaaatgttcagggatggaggagcctagctgtaaccagagcgaggca
gatctgggctaccccggaggcaaggcccggatcatccacaaggactcggacatcattacc
gccttcgccatcaacaaggctaatcggaactgcttagtcatggcctccactcatgacatc
caggaactggacgtgtcctccatcttggccactcagattctgacgtggatcgacgacgat
accgaggccgaggccaaaggtgatgacttcctggtgatccaggcccgggatgacttcaac
accctccacggcaccaccccctacacccacagcagcctagggacgcccatcaacatgccc
tggctcgggggcctgcagacggggagaggcgctgccgtgctcatcaaaaggaacatcaac
aacgtgagaaggatgacctcccacccaaccttgccttactacttaacaggagcgcaggac
ggaagtgtccggatgtttgagtggggccactctcagcagatcatctgcttccgaagtcca
ggcaattccagagtcacacggatacgattcaaccaccaaggaaacaagtttggtatcgtt
gacgctgacggagccctacgtctatggcagaccaatacgactgggaacacccctaaaccc
tacctgacattgcagtgccataataagacggctcacgactttgtgtttgtgggctcatcc
tccctcatagccacagcagggctgtcaacagacaacaggaatgtgtgtctttgggataca
ttggtgaatccaatgaacagtctagtgcacgcctttagttgtcatgagtcgggggccacg
gtgctgtcgctggccgccaggcagcagctgctgatcacaggtggcaggaagggctggatc
agtgtgctggagctcccccacaggcaccagcgccagagcttccaggcccacgactccccc
gtcaaggccctggccgtggaccccaccgagggcagcttcatcagcggctctgccgagggc
aacatcaaggtgtggagcctgtccacgcagtgcttactgcatcagttccccaacgaacac
gctcgtcagtccctgttccggaatctgggcacgggcgtgatgcagatcgaggtgggcccg
gccaaccacatcttttcctgtggcgccgatggtaccatgaagatgaggattctccctgac
cgcttcagcgtcaacaatggcaacctgaagaacgacgtcaagttcataatttag
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integrated database retrieval system