Salmo salar (Atlantic salmon): 106586668
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Entry
106586668 CDS
T04363
Symbol
rpgr
Name
(RefSeq) retinitis pigmentosa GTPase regulator
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106586668 (rpgr)
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106586668 (rpgr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
106586668
NCBI-ProteinID:
XP_014029660
UniProt:
A0A1S3PPN9
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Position
ssa25:35673829..35727876
Genome browser
AA seq
1893 aa
AA seq
DB search
MTGQTEHEIPETGAIFTFGKSKFADNVPSKFWLKNDHPEEISCGGDHTAVVTGHSRLFMF
GSNTCGQLGLGLNINVNKPTAVKVLKTEKVKFAACGRDHTIVCTWSGRVYGAGSNQEGQL
GLGHCDDTNTFHLIRPFSDHAPIKMLAAGCNTSAALTEDGRLFMWGDNSVGQIGLGAESY
ASEPREVMVGQSVAWVSCGYHHSAFVTVDGDLYTFGESRNGRLGLFPDQLANHRVPQQVE
GIQDPVIQVSCGGEHTVALTKEDVYTFGRGQHGQLGHGTFLFEAPLPKALVHFRNGRVSH
VTCGENHTAVITDSGILYTFGDGRHGKLGLGEENFTNQFRPTLCPRFLKYSVQSVAGGSS
HMLVLAMPRRPEVEEVVIEEDDVTETILETLETYTELLLMDPSLLMSNPPTAPPLWTLSA
RARRRERECSPEQFGQMFRNLPPLMSGFFNTSLPVSRNIRISRTPCKDPSTSSLSSNPSP
NNAPSPSLSLKPRGKPPLTPSRSPQFTFPDPPCPSLSSKSSPKKKKPTPSKSPKSTCKEP
ISPSQSFKSMPKLIPDPTLTPKSPFKKPTDYNQYPKTLSKGHPSPSRSPTSPQTERNEDT
VTEAPESLMLIENMEDEKDTLSNLASLSRGDSGDETGTTSAEQKDKGHKKGRALWRSVKE
AERKVEQTLINRKEELPSHKALPTELQRSSSLSSLKAEAIPTKSSKPLKTPQNPQTPARG
KENITLTTEKAGLKVKTSKLESNLQSTGKAGSKLSTPARKQSKLSESKPSTPKHSQVQIS
VSKPSTPKHDQSKLSEVNKGTEMKGKGPVKIRSKEAKEDTKTIEVQNKPLQGVKSASVKG
KQLEVKSTPVKSNIQGVKSAPVKVKGKQLEVKSTPVKSNIQEAKSSTVKVKGKPVEKEPI
PIKTVAESTPLNVKRIPKEVVDKNKPSEGKSTPIKGQRKAKEVNEQKTGESITLKESGTT
EGNKMAVKDKGKVTETKSAPTKTKNVPKPEEVKAKLTELNGTPVKVKSKPTEVSSQPILV
EPTSKAKAPSASLSLSDAMPQNTWDKKSVKSELREPLAVSQVKDRVAVPGEDTIGESQEG
EPGWGGFLSDAASLLPAVGVAGVAMGVLSEAVTSVRGFQSESDTATSIPPRRSSRVERFT
KQSAITQPSSSSSSSTSDPSAVAQRNRTAIRISVLGNSDQEAGSRSSEKNPDNTEAASDR
SGGQAEVDDDENTSRGQRSEAENDEHEDFTKGQGEEDDRSSKGLEEEEDDRSSKGLEEEE
EEDDRSSKGLEEEEEDDRSSKGLEEEEGEDDMSSKGLEESSEQNEGGEAEDSDSVASREG
EEDREEKSEESQGAEGEESKESDSEGTGEGEESKESDSEGTGEGEESKESDSEGTGEGEE
SKESDSEGTGEGEESKESDSEGTGEGEESKESDSEGTGEGEESKESDSEGTGEGEESKES
DSEGTGEGEESKESDSEASLEEEGEEKSEESDGEGEEGESGSGTSGEGEEEDKSEEESSD
EESGDENKEDKEEGGDESGSEAESKSEGSAEEEEDEQAEESESEESKATESGEEEGEGES
GTDEEGEGEGKEGCESEEEEASVSEEEEEEEDDDEENGAESGEGEGNVGEEEEAVDGEEE
EDENEGEEENGEVEEGEEEEEGGEDDEAEEEDASGEEELEDEKSEEEEGEEEDEGEEEDD
KGEGEEGEGEEEGEGEEEEESKDQEEGEENNEEEKGDDEGEKEGEEDGEKQEDEKEEIEV
DEERVEEANKQEEEREKEEEEEKEEKKDRQEVDGKDTEGEEAGEKGEEKGDEKEGKENKE
IDGELEEAAAGEQKGEMKVEETGEEEGEEEGEEEVEEEKYIKEEQVEEEEDEKDRSAYYV
YGDDEDTYARRSGGTPWCAPIKVKHGDVNTMET
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcagacggaacatgaaatacctgaaacaggagcaatcttcacttttgggaag
agcaagtttgctgataatgtgcccagtaaattctggctgaagaatgaccatccagaagaa
atctcgtgtgggggtgatcacactgctgtcgtaacaggccatagcaggctgttcatgttt
ggaagtaatacctgcggtcagctaggactggggttaaacatcaacgtcaacaagcccact
gctgtgaaagtgttgaagactgaaaaagtgaagtttgcagcatgtggaagagaccacaca
attgtgtgcacatggagtgggcgtgtttatggtgctggcagtaaccaggaggggcagctt
ggtttgggacactgtgatgacacaaacaccttccacctgattcgtcccttctctgaccac
gcaccaatcaaaatgcttgctgctggctgcaacacctcagctgctctgacagaggatggc
aggctgttcatgtggggtgataactcggttggccagatcggtctgggggcagagagctac
gcctcagagcctagagaggtgatggtggggcagtcagtggcctgggtgtcctgtggatac
caccactcagcgttcgtcacagtggacggggacctctacacgtttggggagagtcggaac
ggaaggctgggtctattccctgaccagctggccaatcacagagtccctcagcaggtggaa
ggcatccaggacccggtcatccaagtgtcctgtggaggggagcacacagtggcactcaca
aaggaggatgtgtacacgtttgggcggggtcagcatggtcagctgggccatgggaccttc
ctattcgaagcacctctgcccaaagcactggtccacttccggaacggcagagtcagtcac
gtcacctgtggagagaaccacaccgctgtgatcacagacagtgggattctgtacaccttt
ggggatggtcgccatggtaaactaggactgggggaagagaacttcaccaaccagttcaga
ccaacactgtgcccacgcttcctcaaatacagtgtccagtcagtggcaggtggcagctct
cacatgctggtgctggctatgcccagacgcccagaggttgaggaagtggtgatagaggaa
gatgatgtcacagagaccattctggagactctggagacctacactgagctgctgttgatg
gacccctccctcctgatgtccaacccaccgaccgcacctcctctctggaccctgtctgct
agggcccgccgcagggagagggagtgttctccagagcagtttggccagatgttccgtaac
cttcctcctctgatgtctggcttcttcaacacctcccttcccgtgtccaggaacatccgc
atctccagaacaccatgtaaagacccctccacctcctcactgtcctccaatccctcccca
aacaacgcccccagtccctctctgtcactcaaacccagaggtaaaccccctttaacacca
tcacggtcaccccaattcacattcccagaccctccctgcccttcactctcctcaaagtcc
agccctaagaagaagaagcccaccccgtcaaaatcaccaaaatccacatgtaaagaaccc
attagcccctcacagtccttcaaatccatgcctaaactcatccccgaccccacactgacc
cctaaaagcccatttaaaaagcccacagattacaaccaataccccaaaacgctgtctaag
gggcacccaagcccttctcggagtcccacctcaccacagacagagaggaacgaggacaca
gtgacagaagcccccgagagcctgatgctcattgagaatatggaggatgaaaaggacacg
ttatcaaacttggcatcactatcgagaggagattctggcgatgagactgggactacatct
gcagagcagaaggataagggacataaaaagggtagggctctttggagatctgtgaaggag
gcagagaggaaggttgaacaaaccctgatcaacaggaaggaggagctaccttcccataaa
gcccttcccactgagctccagagaagttccagtttgagttcgttgaaggcagaggccatt
cccacaaagagttccaaaccactaaagacccctcagaacccccaaaccccagccaggggc
aaggagaacatcactttgacaacagaaaaggctggccttaaagtgaaaaccagtaaacta
gagagcaatcttcaaagcacaggtaaagcagggtctaagctaagtacacctgcaaggaaa
caaagcaagttatctgaatcaaaacctagcactcctaaacacagtcaggtccagatatct
gtgtctaaacccagcactccaaagcatgatcaaagcaagttgtctgaggtgaataaaggt
acagagatgaaaggtaaaggccctgtaaagatcagaagtaaggaggcaaaggaagatact
aaaactattgaagttcaaaataaaccacttcaaggggtcaagtccgcttcagttaaaggt
aaacaattagaggtcaaatccacccctgtgaaaagtaacattcaaggggtcaagtccgct
ccagtcaaagttaaaggtaaacaattagaggtcaaatccacccctgtgaaaagtaacatt
caagaggccaaatcctctacagtcaaagttaaaggtaaacctgtggaaaaggagccaatt
ccaattaaaactgtggctgaaagcactcctttgaatgtaaagaggattcctaaggaggta
gtagataagaacaaaccatctgaaggtaaaagcactccaataaagggacaaaggaaggca
aaagaggtgaatgaacaaaagactggagagtctattactctcaaagagtcagggacaaca
gaggggaacaaaatggcagttaaagataaaggcaaagtcacagaaacaaaaagtgcaccc
accaaaacaaaaaatgtgcctaaacctgaagaggttaaagctaaattgactgagttgaat
ggaaccccggtgaaagtgaaaagcaagccaacagaggtttccagccaaccaatcttagta
gaacctacctcaaaggccaaagcaccatctgcatcactgtcattatcagatgcaatgcct
caaaatacttgggataagaagtcagtgaagtctgagcttagagagccactggctgtctca
caggtcaaagatagagtggcggtcccaggggaagataccattggtgaatcccaggagggg
gagcctggctggggaggatttctcagcgatgcagcctctctccttccagccgtgggggtg
gcaggcgtagccatgggggtcttgagtgaggcggtgacaagtgtgagggggtttcagtca
gagagtgacacagccacctctattcctcctcggcggtccagccgggtagagaggttcacc
aaacagagcgccatcacccagccttcctcctcctcctcctcttcaacatcagatcccagt
gcagtagcgcaaagaaacaggaccgccatacgcatcagtgttcttgggaattctgatcag
gaagcagggagcaggagttctgagaagaacccagacaacacagaggctgctagtgacagg
tcaggaggtcaggccgaggttgatgacgatgaaaacactagtagaggtcaaaggtcagag
gctgagaatgatgaacatgaagatttcacaaagggacagggagaggaggatgacaggagt
agtaagggtctggaagaagaggaggatgacagaagtagtaagggtctggaagaagaggag
gaggaggatgataggagtagtaagggtctggaagaagaggaggaggatgacaggagtagt
aagggtctggaagaagaggagggggaggatgacatgagtagtaagggtctggaagagagc
agtgaacagaacgaagggggagaagcagaagacagtgattctgtggccagcagagaagga
gaggaggatagagaagagaagagtgaagagagccagggcgcggagggggaggagagcaaa
gagagtgattctgaggggacaggagagggtgaggagagcaaagagagtgattctgagggg
acaggagagggtgaggagagcaaagagagtgattctgaggggacaggagagggtgaggag
agcaaagagagtgattctgaggggacaggagagggtgaggagagcaaagagagtgattct
gaggggacaggagagggggaggagagcaaagagagtgattctgaggggacaggagagggt
gaggagagcaaagagagtgattctgaggggacaggagagggggaggagagcaaagagagt
gattctgaggggacaggagagggtgaggagagcaaagagagtgattctgaggcaagccta
gaggaggagggagaggagaaaagtgaagagagtgatggggaaggagaagagggagagagt
ggttctgggacaagtggagagggggaagaggaggataagagtgaagaagagtccagtgat
gaagagagtggggatgaaaacaaagaggacaaggaggagggtggtgatgaatcaggaagt
gaggctgagagcaagagtgagggatcagcagaagaggaggaagatgaacaagcagaagaa
tcagagagtgaagaaagtaaagctaccgagtcaggagaggaggaaggagagggagagagt
ggaacagatgaggaaggagagggagagggtaaggaaggttgtgaaagtgaagaagaggag
gcaagtgtaagtgaggaggaggaagaagaagaggatgacgatgaggaaaatggtgcagaa
agtggagaaggtgagggcaatgtaggagaagaagaggaagcagttgatggtgaggaagaa
gaggatgaaaatgaaggtgaagaggagaacggtgaagtcgaagagggtgaggaggaagag
gagggaggagaggatgatgaggcagaggaggaagatgctagtggagaggaggaacttgaa
gatgaaaaaagtgaggaagaggagggcgaagaagaagatgagggggaagaagaagatgat
aaaggagaaggggaggagggagaaggggaggaagagggtgaaggggaagaagaggaagaa
agtaaagatcaggaagaaggagaagagaataatgaagaggagaaaggagatgatgagggt
gagaaggaaggagaggaagatggtgaaaaacaggaagatgagaaagaggaaatcgaagtg
gatgaagagagagtggaggaagcgaacaaacaagaagaggaaagggagaaggaagaggag
gaagagaaggaagaaaaaaaagatagacaggaagtagatggaaaagacacagagggagag
gaggctggagaaaagggggaagagaagggagatgaaaaagaagggaaagaaaataaagaa
attgatggtgaattagaagaagctgctgcaggggaacagaaaggggagatgaaggtggag
gaaacgggagaggaagaaggtgaagaggaaggagaagaagaagtggaggaagaaaaatat
attaaagaagaacaagttgaggaagaagaagatgagaaagataggtcggcctactatgtc
tatggagatgatgaagacacgtatgctcgtagaagtggagggaccccttggtgcgctccc
atcaaggtgaagcacggcgatgtgaatactatggaaacgtga
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