Salmo salar (Atlantic salmon): 106588669
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Entry
106588669 CDS
T04363
Name
(RefSeq) thyroid hormone receptor beta
KO
K08362
thyroid hormone receptor beta
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106588669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106588669
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106588669
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106588669
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
106588669
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106588669
NCBI-ProteinID:
XP_014033354
UniProt:
A0A1S3Q1N1
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Position
ssa27:complement(19869050..20003009)
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AA seq
511 aa
AA seq
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MNYCMPDMYEMPHGVGGGYPMQGGGEYCMYGGDGPGGYGHCEPQPMHQIHPPCMEQAWPP
SQPYACSYPGPNPVFKSEYCTMEVPLSHYNHQPDYYSEGKPDFSHMQWMQEVNKKGYIPS
YLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEAKCVIDKVTRN
QCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKDELQKTVWDRPEPSQEEW
DLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAVGVKETKPEDI
GQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCM
EIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFHLDDSEV
ALLQTVILLSSDRPGLTSVDRIERCQEEFLLAFEHYINYRKHKVAQFWPKLLMKVTDLRM
IGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcatgcctgacatgtatgagatgcctcatggcgtgggcggtggctacccg
atgcagggcggtggggagtactgcatgtatggaggtgatggtcccggggggtacgggcac
tgtgagccccagcccatgcaccagatccaccctccctgcatggagcaggcttggcccccc
agccagccctacgcctgctcctacccaggacccaaccccgtgttcaaaagtgaatactgc
accatggaagtgcctctcagccactacaaccaccagcccgactactattctgaggggaag
cctgacttctcccacatgcagtggatgcaagaggtcaacaagaaagggtacatccccagt
tacctggacaaggacgagttatgtgtggtatgtggggataaagctacaggatatcactat
cgctgtatcacctgtgaaggatgcaagggtttcttccggcggacgatccagaagaacctg
aacccgacgtacgcttgtaagtacgaggcaaagtgcgtcatcgataaggtgaccaggaac
cagtgccaggaatgtcgcttcaagaagtgcatcgctgtcggcatggcaacagacttggtg
ctggacgacagcaagcggctcgccaagcggaagttgatcgaggagaaccgtgagcggcgg
cggaaggatgagctccagaagacggtgtgggaccggcctgagccgtcccaggaggagtgg
gacctgatccgcatggtcaccgaggcccacatgtcaactaacgcccagggcaaccactgg
aaacagaaacgcaagttcttggtcgaggaagcaatgctacttaatgaaataacatgtaat
ttattctatacttctgaccagagtgcagtgggggtgaaggaaaccaagcctgaggacatt
ggtcaagcgccggtcataaatgcacctgaagggagcaaagtggacattgaagccttcagt
cagtttacaaaaattatcacccccgccattacccgagtggtggactttgccaaaaagctg
cctatgttctgtgagctgccttgtgaagaccagattatcctattgaaaggctgctgcatg
gagatcatgtctttacgggcggccgttcgctacgacccagagagcgagacgctgacactt
aacggggagatggccgtgacccgcggccagctgaagaacggaggcctgggtgtggtgtcg
gacgccatctttgatttgggagtgtcgctgtcgtcgttccacctggacgactctgaggtc
gctctgctacagaccgtcatcctcctgtcctccgaccgtccggggctgaccagcgtggac
cgtattgagcgctgtcaggaggagttccttctggcctttgaacattacatcaactaccgc
aaacacaaggtggcgcaattctggcccaagctgctgatgaaggtgacggacctgcggatg
atcggggcgtgccacgcctcccgcttcctgcatatgaaggtggagtgccccaacgaactc
ttccccccactcttcctggaggtctttgaggattga
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