Salmo salar (Atlantic salmon): 106589061
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Entry
106589061 CDS
T04363
Name
(RefSeq) transcription factor SOX-4-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106589061
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106589061
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
106589061
NCBI-ProteinID:
XP_014034212
UniProt:
A0A1S3Q2N9
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Position
ssa27:complement(37394866..37398840)
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AA seq
386 aa
AA seq
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MVQHMSHAESTDSFSPGGDCTDTGDMDLEMDASPTPGSPLSSTGGDRGNVAWCKTPTGHI
KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDTDKIPFIREAERLRLKH
MADYPDYKYRPRKKVKTPSSKTERGERGEKGADRSRGSKSSSKRSSGSRGNSRAHKPGQG
SAKLPTQGQECASPTDHHTLYKSRSVTGARQIPDKPARRGYMFSGGGSLDSGPPSVGVPG
SPALSSSSESCDPMSLYEDQATGANEALSSNPSTSSPSSAVRLRYTRASSPTPSASHSSS
SSLSSSSDEELEDERFELQPSPGFESMSLGSMGPCESELDRDLDWSFGECGAGSHFDFPD
YCTPEVSEMISGDWLESTISNLVFTY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcacatgagccacgcagagagcacagattcattctctcctggtggggactgc
accgataccggagatatggatttggagatggacgcgtctccgactcccgggtctccgtta
tcctccacgggaggggaccgaggcaacgtcgcctggtgtaaaacccccacgggacacatc
aagagaccgatgaacgcatttatggtgtggtctcagatcgagaggagaaagatcatggag
cagagcccggacatgcacaacgctgagatttccaagcggctgggcaagcgctggaaactg
ctcaaagacacagataagatcccgttcatccgggaagcagagcggctgagactcaagcac
atggccgactaccctgactacaagtatcggccacgaaagaaggttaagacgcccagctcc
aagacagagcggggagagaggggagagaaaggcgcggatagaagcaggggttctaagtct
tcatcgaaaagaagctctgggtctagggggaacagcagagcgcacaagccgggacagggg
agcgccaagctgcctacccaggggcaggagtgtgcgtctcccacggatcaccacacgctc
tacaaatccaggtcagtgactggtgcccggcagataccagacaagccagccaggcgcggc
tacatgtttagtgggggagggagcttggacagcgggccaccctctgtgggagtcccaggg
agtccagccctgagcagctcatctgagtcctgtgacccgatgagcctgtatgaagaccag
gcgacgggagcgaacgaagcactttcctccaacccttcaacatcctcaccatcatcggca
gtccgcctcaggtacacacgtgcgtcctctccaaccccgtccgcctctcactcctcttcc
tcctccctctcttcttcctcggatgaagagctggaggatgagcggttcgagctacagccg
agccccgggtttgagagcatgtctctgggcagcatggggccgtgtgagtcggagctggac
agggacctggactggagcttcggcgagtgtggggcgggatctcactttgacttccccgat
tactgcacccccgaggtcagcgagatgatctcgggagactggctggagtccaccatctcc
aacctcgtcttcacttactga
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