Shewanella avicenniae: JYB87_01930
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Entry
JYB87_01930 CDS
T07845
Name
(GenBank) type IV pilus secretin PilQ family protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
savi02044
]
JYB87_01930
02035 Bacterial motility proteins [BR:
savi02035
]
JYB87_01930
Secretion system [BR:
savi02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JYB87_01930
Bacterial motility proteins [BR:
savi02035
]
Pilus system
Pilus assembly proteins
JYB87_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
QSX34036
LinkDB
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Position
443921..445972
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AA seq
683 aa
AA seq
DB search
MRSIVAHNEPGKTGAWLRLALGCVLAVSLIPCAMADNKLVNVKYHTVIDHQLELELMFES
PVADPEIQLSAEPAGIRLNFADTTSGLEKTELPIDQVGVNKVTTRQQEKTLQVAVDLAKV
KPYQGKAFGNTYRLTINDSVLDPKNSQANNPFVNKIKNIDFHRAGEDGGELVVELNNAAV
AANVQQVGAKLEVQFYNTEIPDDMLYVMDVQDFATPVRSFETFRNDMTTRFTIDVKGVYD
YQYEQDGNLFKVVMKKATQTASVEPKKKYNGKNISLNFQKISVRTALQIIADYNDFNLVT
SDTVDGSITLRLDDVPWDQALDLILQTKGLDKRIEGNILMVAPAEELAIRESQDLKNKQE
VAQLAPLYSEYLQINYAKATDIAALLKGDGSSLLTERGSVAVDERTNTLLVKDTADTLEN
VHRLIDALDIPIKQVLIESRMVTVSDTVAQDLGVRWGVTDLQNDYGTSGTLEGASGLVSG
TTPALADRLNVNLPAGGNAASIAFSVAKLTDGTLLDLELSALEQENKGEIIASPRITTSN
QKAAYIEQGVEIPYVESASSGAATVQFKKAVLSLRVTPQITPDNRVILDLEITQDSQGEI
VQTPLGEAVSINTQKVGTQVLVDNGETIVLGGIYQQQIINAVNKVPVLGDIPVLGNLFKS
SSDANERHELLIFVTPKIVTEDF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagatctattgtggcgcataacgaacctggaaagacaggcgcatggttgcgactcgca
ttgggatgtgtattggcggttagtctcattccttgcgcaatggcagacaataagctggtt
aatgtgaaatatcacactgtcattgatcatcaacttgagctggagttgatgtttgaaagc
cctgttgcagacccggaaattcaattatccgctgaaccagcgggtattcgtcttaacttt
gctgacaccacctctggccttgaaaaaacagaactgccaatcgatcaggttggcgtgaac
aaagtaactacgcgtcagcaagaaaagacgctgcaggttgcggtcgatcttgccaaggtc
aagccttaccaaggtaaagcttttggtaatacctatcggttaactatcaatgattctgtg
cttgaccctaaaaatagccaagccaacaatccatttgtaaacaaaattaaaaacatcgat
tttcaccgtgctggcgaagatggtggtgagttggttgttgaattgaacaatgctgccgtc
gctgccaatgtgcagcaggtgggcgcaaagcttgaagtgcagttttacaatactgaaatt
ccagacgacatgttgtatgtcatggatgtacaagactttgcaacgcccgttcgcagcttt
gaaaccttccgtaatgatatgaccacacgcttcacgattgatgtcaaaggtgtgtatgac
tatcaatatgaacaggatggcaatctgtttaaagtggtcatgaaaaaggccactcaaaca
gcctcagttgaaccaaagaaaaagtacaacggcaagaacatctcactgaacttccaaaag
atttcggtaagaactgcgctgcaaattattgctgactataacgattttaacttggtcacc
agtgataccgttgatggcagtattacgttgcgccttgatgatgtgccttgggatcaagca
ttggatttgatcctgcaaacaaaagggttagataaacgcatcgaaggcaatattttgatg
gtggcacccgctgaagaactagcgattcgtgagagccaagatctgaaaaacaagcaagaa
gttgcccagttggcgccgctttactcggaatatctgcagataaactatgccaaagcgact
gatattgcggcgctgctaaaaggtgatggctcaagtttgttgactgaacggggtagcgtt
gcagttgacgaacgcactaacactttgttggtgaaggataccgcggatacattggaaaac
gtccatcgcttgatcgacgcgctggatattcctatcaagcaagtattgattgagtcccga
atggttaccgtaagtgacaccgtggcgcaggatttgggtgtgcgttggggggtcaccgat
ctgcagaatgactatggtacttctggaacattggaaggtgcatcggggctagtctccggg
acaacgccagcgcttgctgatcgtcttaacgtgaatctcccagcaggtggaaatgcggct
agtatcgcttttagtgtggcgaaattgacagatggcactttgctagatcttgaattgagc
gcattagagcaggaaaacaagggcgaaatcattgcgagccctcgtattaccacgtctaac
caaaaggcggcttatatcgagcaaggtgtggaaatcccctatgtcgaatcagcttctagt
ggtgccgctaccgttcagttcaaaaaggcggtgttatcactgcgagtaaccccacagatt
acacctgataatcgtgtgattctggatttggaaatcactcaagattcacaaggtgagatt
gtgcaaacgccattgggtgaagcggtatcaatcaacactcaaaaagtgggtacacaagtg
ttggtggacaatggtgaaaccatcgtgttgggcggtatctatcaacaacaaatcatcaat
gcagtgaataaagtgccggtcttgggagatattccagtactgggtaacttattcaaaagc
agctcggacgctaatgaacgtcatgaactgctgattttcgtgacgccaaaaatcgtcact
gaagacttctaa
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