Shewanella avicenniae: JYB87_06545
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Entry
JYB87_06545 CDS
T07845
Symbol
panP
Name
(GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
savi
Shewanella avicenniae
Pathway
savi00770
Pantothenate and CoA biosynthesis
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
JYB87_06545 (panP)
Enzymes [BR:
savi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
JYB87_06545 (panP)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
STAT_int
SepSecS
Motif
Other DBs
NCBI-ProteinID:
QSX34878
LinkDB
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Position
complement(1478428..1480080)
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AA seq
550 aa
AA seq
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MSASKSRKATASEESLWRIFTVPEAPESTLSKIEQALSEDLEGFLSQNIVALEKPLHEIE
KDFRAFEIPDSPKFVSDYTEEMMQTLIAHSVHTAAPSFIGHMTSALPYFVLPLSKMMVGL
NQNLVKIETSKAFTPLERQVLGMMHHLIFAEQPSFYQRWMHSADHSLGAFCSGGTVANIS
ALWIARNRLLKPDGEFSGVTQDGLFAGLRHYGWDDLAILVSERGHYSLGKTADLLGIGRK
NIIPIATDANNRVDVTAMRQAAAQLAERNVRVMAIIGVAGTTETGNVDPLNELADLAAEL
QCHFHVDAAWGGASLMSRKYRHLLAGIERADSVTIDAHKQMYVPMGAGMVIFKDPELARS
IVHHAEYILRRGSKDLGSQTLEGSRPGMAMLVHACLQIIGREGYEILIDNSLGKARYFAS
LIKQHPDFELISEPELCLLTYRYVPLKVRRALAEAVEQQQWPRVEKINKLLDELTQTIQK
SQREQGKSFVSRTRLQPAVYQRQSVTVLRVVLANPLTSEQILKDVLNEQVTIAETKSHLL
NQLDKLCQPI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagcaaatcacgcaaagcaaccgcttcagaagaaagtttgtggcgtattttt
acggtgccggaagcgccggagtcgacgctgagtaagatagaacaagcgctatcagaggac
ttagaaggctttctaagccaaaatattgtggcgttagaaaagccgttgcatgagatcgaa
aaagattttcgcgcctttgaaatccctgattcgcctaagtttgtttctgactataccgaa
gagatgatgcagaccttgattgctcactcagtgcacacggcggcaccgagctttattggg
cacatgacctctgcactgccctatttcgtgttgccactgtcgaaaatgatggtcggactc
aaccaaaacttggtcaaaatcgaaacatcaaaagcctttacgccgctcgagcggcaagta
ctgggcatgatgcatcatctgatttttgccgaacaaccgagcttctatcaacgctggatg
cacagtgctgaccactcactgggggcattttgctccggcggcacagtggcgaatatttcc
gctctttggattgcccgcaaccgcctgttaaaacctgatggtgagtttagcggtgtcacc
caagacggcttatttgctggattacgccattatggttgggatgatctggcaattttagtc
tcagagcgtggtcactattcactgggcaaaaccgccgatctgctcggcattggtagaaag
aacattattcccattgctaccgacgccaataatcgggtggatgtgacggccatgcgccaa
gcagccgcacagctcgccgagcgcaatgtacgagtgatggccattatcggcgttgcgggc
accactgagacaggtaatgtcgatccactcaatgagttggccgatctcgccgctgaactg
cagtgtcattttcacgtggatgccgcttggggtggcgccagcttgatgtctcgcaagtac
cgtcatctgctggcgggcattgagcgtgcagattcggtcactattgatgcacataaacag
atgtatgtaccgatgggcgcgggcatggtgatttttaaagaccccgaacttgcgcgctct
atcgtccatcacgctgaatacattttacgccgcggctcaaaagacttaggcagtcaaacc
ctcgaaggttcgcgcccagggatggcaatgctggtgcatgcctgtttgcagattatcggc
cgtgagggttatgaaatccttatcgataactcgctgggaaaggcacgttatttcgccagt
ttaatcaagcaacacccagattttgaactgatcagcgaacccgaactgtgtctgctgacc
tatcgttatgtgccgcttaaagtacgcagagccttggctgaagcggtagagcaacagcaa
tggccgcgagtggaaaagatcaacaaactgttggatgaactgacccaaaccattcagaaa
tcgcaacgggaacagggtaaatcgtttgtatcgcgtacacgcctgcaacctgcggtgtat
caacgtcaaagtgtgaccgtactgcgagtggtgttggccaacccgctcacctcagagcag
atcctcaaagatgtgctgaatgaacaagtgaccattgctgaaactaagtcacacttgctc
aaccagctcgataaactctgccaaccaatctaa
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