Shewanella avicenniae: JYB87_11465
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Entry
JYB87_11465 CDS
T07845
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
savi
Shewanella avicenniae
Pathway
savi00020
Citrate cycle (TCA cycle)
savi00785
Lipoic acid metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
savi01210
2-Oxocarboxylic acid metabolism
Module
savi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
savi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB87_11465 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JYB87_11465 (sucA)
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JYB87_11465 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QSX32384
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All DBs
Position
complement(2600863..2603688)
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AA seq
941 aa
AA seq
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MHQGIMKAWLESSHLSGANSAYVEEMYEAYQEDPSAVSDDWRAVFDNLPPVNGTDTSVPE
PAHSKIRDYFRALASDSRTKTTSRVTDPDLDAKQVKVLQLINAYRFRGHQNANLDPLALW
KRDAVAELDPAFHGLGAEDMDREFNTGSFAYGNGTMKLRDLVKALKATYTESIGAEYMHI
TDTEEKRWIQHQIESSLGKAAYSTAVKARLLEGLNAAEGMEKYLGAKFPGAKRFSLEGGD
SLVPMLREIIYRAGEAGTKEIVIGMAHRGRLNVLVNILGKRPAELFDEFAGKHHEDGLGS
GDVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARLDRRGSDDGLQVMPI
TIHGDSAIAGQGIVQETFNMSQTRAFKVGGSIRIVVNNQVGFTTSNHHDTRSTEYCTDIA
KMVQAPIFHVNGDDPEAVAFISQVAVDYRNTFKRDVVIELVCYRRHGHNEADEPSATQPM
MYTKIKKHPTTRKIYADRLVEEKSLGADDVTGLVNDYRDALDKGDCVVKEWRPMTLHTVD
WSPYLNREWDEAYNGSIGLDHIKELAAKISYVPETHKLHSRVEKIYTDRGAMAKGEKLLD
WGFAETLAYATILEDKKRVRITGQDSGRGTFFHRHAVLHNQNDGTTYLPLRHVADKEGPF
DVNDSVLSEASVLAFEYGYATAEPAGLTIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLC
GLTLLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCIPSTPAQVYHMLRRQVVRPMRRP
LVVMSPKSLLRHPMAVSSLEELAEGCFRNVIGEVDPLEPAKVDRVVFCSGKVYYDLLDRR
RKENIDNVAIVRVEQLYPFPHEELEAVLADYQHVKDFVWCQEEPQNQGAWYCSQHHFWTS
IPKGAQLSYAGREASAAPACGYPELHTRQQESLIVSALNLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcttggctcgaatcgtctcacttgagtggggcaaactcg
gcctatgtagaagagatgtatgaagcctatcaagaagaccccagtgcagtctctgacgac
tggcgtgccgtctttgataatctcccaccagtaaatggtaccgataccagcgtaccagaa
cctgcccattccaaaattcgtgattatttcagagcgttagcgagcgacagtcgaactaag
actaccagccgcgtcacagaccctgatctcgatgcgaaacaggttaaagtgctgcagtta
atcaacgcttaccgcttccgcggtcaccaaaatgccaatttagacccattggccttgtgg
aagcgtgacgctgttgccgaactcgacccagcattccacggcctaggtgccgaagatatg
gatcgcgagttcaatacaggttctttcgcctacggtaatggcaccatgaagctccgtgac
ttggttaaggcgcttaaagcgacttacaccgaatctatcggcgccgaatacatgcacatt
accgacaccgaagagaagcgttggatccagcatcagatcgaatcttctttaggtaaggca
gcctattcaacagctgtgaaagcacgtttgttggaaggtttgaacgctgccgaagggatg
gaaaaatatcttggtgcaaaattccctggcgcaaaacgtttctcgcttgaaggcggtgat
tcattagtgccaatgctgcgtgaaatcatctatcgcgctggtgaagctggtactaaagag
attgttatcggtatggcgcaccgtggtcgtctaaacgtgctggtgaatattcttggtaaa
cgtccagcagagctgtttgacgaattcgccggtaagcatcatgaggacggtttaggctct
ggtgacgttaaataccaccaaggtttctcttctgattttgaaacccccggtggtaatgtg
catttggcgttggcgtttaacccatcgcacctcgaaattgttaacccagtggtgatgggc
tctgtgcgcgcacgtctagaccgccgtggtagtgacgatggcttgcaagtgatgccaatc
accattcatggtgactcggccattgctggtcaaggtattgtgcaagaaacctttaacatg
tcgcagactcgggcatttaaagtgggcggttcaatccgtatcgtagtgaacaaccaagtg
ggttttactacctctaaccatcatgatacccgttcaacagaatactgtactgacattgct
aagatggttcaggcgccaatcttccacgtcaatggtgatgaccctgaagccgttgctttc
atctctcaagtggcggttgattaccgtaacaccttcaaacgtgatgtggtgattgaactg
gtatgttatcgccgtcatggtcataacgaagctgatgagccaagtgcaactcagccaatg
atgtacaccaagattaaaaagcatccaacaacgcgtaagatttacgccgatcgtctggtt
gaagaaaaatccttgggcgctgacgatgttactggcttagtcaacgattatcgcgatgcc
ttggataaaggggattgcgtggtcaaagagtggcgtccaatgacgttgcacaccgttgac
tggtcaccttatctgaatcgcgaatgggatgaagcgtataacggttctatcggtttagat
catattaaagagttggcagcaaaaattagctatgtgcctgaaacccataaactgcatagc
cgtgttgaaaagatttataccgatcgtggtgccatggcaaaaggtgaaaagctgctggat
tggggctttgctgaaactttagcttacgccacaattttggaagataaaaagcgtgtccgt
atcaccgggcaagactccggtcgcggtaccttcttccatcgtcatgccgtgttacataat
caaaatgatggcacgacttatctgccattacgccacgtggctgacaaagaagggccgttt
gatgtcaacgactctgtgttgtcagaagcctcagtactggcctttgaatatggttatgcc
accgcggaacctgctggtttgacgatttgggaagcgcaatttggtgactttgccaactgt
gcacaggtggtcattgaccaattcttgtcttctggtgagcagaagtggggccgtttgtgt
ggtttgacgctgttgttgccacatggttatgaaggtcaaggtcctgaacactcatctgca
cgtctggaacgtttccttcaattgtgtgcaaaccacaatatgcaggtatgtattccatct
acgcctgcacaggtttaccacatgctgcgtcgtcaggtagtgcgtcctatgcgtcgtcct
ctggtggtgatgtcgcctaagtcgctgttgcgtcacccaatggccgtatcttcactggaa
gagttggcagaaggttgtttccgcaacgtgattggtgaagtagacccacttgaacctgca
aaagtcgatcgtgtggttttctgtagcggtaaagtttactacgacttgcttgatcgtcgt
cgtaaagaaaatatcgataatgttgcgattgttcgcgtggaacagctttatccgttcccg
catgaagagttagaagcagtgttagccgattatcaacatgtgaaagatttcgtttggtgc
caggaagagcctcagaaccaaggtgcatggtattgcagtcagcaccatttctggacttcg
attccaaaaggagcccaattgagctatgccggcagggaagcgtctgcagcaccagcttgt
ggttatccggaattgcatacgcgccagcaggaatctctgatcgtaagcgcattaaatctg
aagtaa
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