Shewanella avicenniae: JYB87_17625
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Entry
JYB87_17625 CDS
T07845
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
savi
Shewanella avicenniae
Pathway
savi00450
Selenocompound metabolism
savi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYB87_17625 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_17625 (selD)
Enzymes [BR:
savi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
JYB87_17625 (selD)
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JYB87_17625 (selD)
Prokaryotic type
JYB87_17625 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
QSX33503
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All DBs
Position
3987143..3988177
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AA seq
344 aa
AA seq
DB search
MSQDPIKLTEYSHGAGCGCKISPKVLTTILASQLPEFVDPNLLVGNHSRDDAAVYKLDDH
TGIISTTDFFMPIVDDPFTFGRIAATNAISDVYAMGGKPIMAIAILGWPINKLSAEVAQQ
VVDGGRQACADAGIMLAGGHSIDAPEPIFGLAVTGTVALEHLKQNDTAKAGDKLYLTKPL
GIGILTTAQKQKKLADADVLIAPEAMCQLNKVGADVAKIAGVHAMTDVTGFGLAGHLLEM
CQGSNLSATVDVAALPLLPKARDYLALGCIPGGTQRNFDSYGEHLPELTEEQKALLCDPQ
TSGGLLIAVAPEAEASLVDTLCSAGIAPIVVGELTARGPQWINL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagatcctatcaagctgaccgaatacagccatggcgctggttgcggttgcaaa
atctcgcctaaagttttgaccactattttggcgtcccagttaccggaatttgtagatccc
aacttattagtgggcaaccacagtcgtgatgatgccgcggtttataaactcgatgatcac
accggcatcatcagcaccaccgacttcttcatgccgattgtggatgatccgtttaccttt
ggccgcatcgccgccaccaatgccatcagcgatgtttacgccatgggtggtaagccaatt
atggcaattgcaattctgggctggccgattaacaagttgtcggccgaagttgcgcagcaa
gtggttgatggcggccgccaagcctgtgctgacgccggcattatgctcgccggcggccat
agtattgatgcgccggagccaatcttcggcctggcagtgaccggtacagtagcgctggaa
cacctcaaacaaaacgataccgcaaaggctggagacaagctgtatctcaccaagccgttg
ggcatcggtattctgaccacggcgcagaaacagaaaaagctggctgatgcagatgtgctg
attgccccagaggccatgtgtcagttgaacaaagtcggtgccgacgtcgctaaaattgct
ggcgtgcatgccatgaccgatgtgaccggttttggtttagccggccacttattagagatg
tgccaaggttcgaatctcagtgctactgttgatgtggctgcattaccattgctgcccaaa
gcgcgcgattatttggctctcgggtgtattccaggtggtactcagcgtaattttgatagc
tacggcgagcatctccctgagctgaccgaagagcaaaaggccttgttatgtgatccgcaa
accagtggcggcttgttgattgccgtggcaccagaggcagaagcgagcttagtggatacc
ctctgttcagccggcattgcgccgattgtggtgggtgaactgaccgcacgcggcccgcag
tggattaacctgtaa
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