Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA): USA300HOU_1634
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Entry
USA300HOU_1634 CDS
T00629
Symbol
recJ
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sax
Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
Pathway
sax03410
Base excision repair
sax03430
Mismatch repair
sax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
USA300HOU_1634 (recJ)
03430 Mismatch repair
USA300HOU_1634 (recJ)
03440 Homologous recombination
USA300HOU_1634 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sax03400
]
USA300HOU_1634 (recJ)
DNA repair and recombination proteins [BR:
sax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
USA300HOU_1634 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
USA300HOU_1634 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
USA300HOU_1634 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF1424
Motif
Other DBs
NCBI-ProteinID:
ABX29641
LinkDB
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Position
complement(1744693..1746966)
Genome browser
AA seq
757 aa
AA seq
DB search
MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQAIESIISDTDINHDAL
QLSDMTKTIERIKRAIANDEKILVYGDYDADGVTATTILVITLQLLGAQVGWHIPNRFTE
GYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLGVDVIVTDHHEIGSTLPEAYA
IVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLV
KQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTD
VEEEAAFLAEQVEHFNRERKDIVATITEEAMAMAETKVKKGDLFLLLAKENWHEGVLGIV
ASKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEILSAHQELIAKFGGHHMAAGMT
MDIENIESLAEGLNKWMKELSKTTSLDPVKQVDVLLTENDITIKNIRDMNRLRPFGTDFS
RPIFEMDDLSVSSVKAIGQQKNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQ
INEWNGNQSPQIIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEIKQQTDKVVLRDLPTSMEDLSNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDIFKKC
YKALITKQETNIQKEGMLLCQHLSVKPDTLKFMLKVFLDLKFVTQEDGLIRINQQPDKRS
IDSSKVYQLRQQRMDVEKQLLYQDFSEIKNWIKSQLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccgaagtataagtggaaattaactaaaccagctgaatacataagtgatgaa
ttaacatcaaaattaaagttaacgccaatcgtaaaaaaaatattagaaagtaaatcgatt
attgatgaacaagcaatagaatccatcatttcagatacagatatcaatcatgatgcactg
caattgagcgatatgactaagactattgaaagaattaaaagagcgatagcgaatgatgag
aaaatcctagtttatggtgattacgatgccgacggtgttaccgcaactacaattttagtg
ataacattacaacttttaggtgcacaagtaggatggcatattcctaaccgctttaccgaa
ggatatggaccaaacgaactagcatttagaaatgctcatgatgaaggcataacattaatc
ataactgttgataatggcatacaaggtcataatgaaattaaaatggttcaagatttagga
gttgatgtcattgtaactgatcatcatgaaattggtagtacattaccagaagcatatgca
atcgtacatccaatgcatccatcgtttaattatccgttccaacaattgtgtggtgcaggt
gttgcatacaaattagcacaagcattgattgaaaatgtacctgattattttaaagcatta
gttgcgataggtaccattgcggatttagtatccttaactgatgaaaatcgatcattagtg
aaacaaggattaaaagtcttaaatgatcaatgtccgacctctgttaaagcattgctaaaa
gaagcgggatacaatgacaatattgatgaagaaacaattggttttattattggacctaga
cttaatgctgtaggtcgtttagatgacgcatcattagcttgcgaattgttgatgactgac
gtcgaagaagaagctgcatttttagcagaacaagttgaacattttaaccgtgaaagaaaa
gatattgtagcaactatcacagaagaagcaatggctatggcagaaacgaaagttaaaaag
ggagatttatttttacttttagcaaaagaaaattggcatgaaggtgtcttaggtattgtt
gcttcgaaaattgtcgaaacatttgctttgccaacattaattttaaatattgatagggag
caaaatcatgcaaaaggctccgccagatcaattgatcaagtgtcgatgtttgaaatacta
tcagcacatcaagagttaatcgctaaatttggcggccatcatatggctgcaggtatgacg
atggatattgaaaatatagaatcgttagctgaaggtttaaataaatggatgaaagaatta
tctaaaacaacttcgttagatcccgtaaagcaagtagatgtattattaacagaaaatgat
ataacgattaaaaatattcgtgatatgaatcgtttaagacccttcggaacagatttttct
agacctatttttgaaatggatgatttatcagtttcttcagttaaggcgataggtcaacaa
aaaaatcatctaaaattgacacttggtgaaagtaatatcgccgcgctattttggcaaaat
ggacacttagaacctgagttacaagatgaacagccaattaatatattaggatctgttcaa
atcaacgaatggaatggtaatcaatcaccgcaaataattattcaagatattgcgatgaat
gaacagcaaatattagattatagaagtaagcgaaaaagtttaccttttacagaaaatgat
gaaaatattgtcgtgcttattcatcctaaaagtgataaagtaaatgcgaatgaatattat
tatggtgaagaaattaaacaacaaactgataaagtagtattaagagatttaccaacgtca
atggaagacttgtctaattccttgcaacaactgcaattttctcaactttatatagttttg
caacataatcattcgatttacttcgatggtatacctaatatggatatttttaaaaagtgt
tataaagcattaataactaaacaagaaacaaatatccagaaagagggtatgttattgtgt
caacatttaagtgtgaaaccagatacacttaaattcatgttgaaagttttcttagactta
aaatttgtaacacaagaagatggtttaattcgaatcaatcaacaacctgataaaagatcg
attgattccagcaaagtatatcaattaagacaacaacgtatggatgttgaaaagcaatta
ttatatcaagatttttcagaaataaaaaattggataaagtcacaattgtcgtga
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