Shewanella amazonensis: Sama_0261
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Entry
Sama_0261 CDS
T00445
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz00061
Fatty acid biosynthesis
saz00071
Fatty acid degradation
saz01100
Metabolic pathways
saz01212
Fatty acid metabolism
saz02024
Quorum sensing
Module
saz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sama_0261
00071 Fatty acid degradation
Sama_0261
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sama_0261
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saz01004
]
Sama_0261
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saz04147
]
Sama_0261
Enzymes [BR:
saz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sama_0261
Lipid biosynthesis proteins [BR:
saz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Sama_0261
Exosome [BR:
saz04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sama_0261
Exosomal proteins of breast cancer cells
Sama_0261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ABL98472
UniProt:
A1S266
LinkDB
All DBs
Position
complement(299560..301215)
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AA seq
551 aa
AA seq
DB search
MQATIKTPVEMLDHWVQNQGDKVYLRQPVNGQYRDFSWRDVKRQMEQIAGSLRHLGLVPG
DKVAVLSKNCAEWFITDLALMHGGYISVPIYPTANADTIRYVLEHSGAKAIFIGKLDHWA
EQEAGVGGSILRMSFPYDTMPTQYGWDQLMTMGQPLTDAPLPAMEDTMTLIYTSGSTGSP
KGAIQTFGSYCWTCTAVVRDLKTDGDDRLLSYLPLAHITERVAIEGSSFYSGSAVAFVES
LDTFVADVQRMRPTVFFSVPRLWTLFQKNIIDKVGFDKLNFLLKLPLISYLVKRKIHKGL
GLDKCRLLGSGSAPIPPSLIQWYHSIGLNICEAWGMTENCAYSIINYPFDASKIGTVGKP
VEGCLVRRSESGELMVKSPGLMSGYYQQPEASAAAFDEDGFFHTGDLCAIDEDGCVSITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPIALVQLSDGATLQAREEV
RASIKATLDAVNPHLESHETVDAVVVVNAPWTIENDVLTPTLKIKRHVLEARYSAKVDGV
RGAKVVWEDEI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccactatcaagactcctgtagagatgctcgaccattgggtacaaaaccagggt
gacaaggtttacttgcgccagccggtaaacggccaataccgtgatttcagctggcgggat
gtgaaacgccagatggagcaaattgccggctcgctcaggcatcttggtcttgtgcccgga
gacaaggtcgccgtgctgtccaagaactgcgccgagtggtttattaccgacctggcgtta
atgcacggcggttatatcagcgtacccatttatcctaccgccaatgccgataccatccgc
tacgtgctggagcacagtggtgccaaggccatttttatcggcaagctggaccactgggcc
gagcaggaagccggtgttggcggcagtattttgcgcatgtccttcccctacgacaccatg
ccgacccaatacggctgggaccagttgatgaccatgggacaaccgctgacagacgcaccg
ctgcctgccatggaagataccatgacgctgatttacacctcgggctccactggcagcccg
aagggtgcaattcaaacctttggcagctattgctggacctgtactgccgtggtgcgcgat
ctcaaaaccgacggtgacgatagattgctgtcgtacctgccactggcccatatcaccgag
cgggtcgccattgaagggtcatccttctattccggcagcgcggtggcctttgtcgagagt
ctggataccttcgtcgccgacgtgcagcgcatgcgaccaaccgtattcttctcggtgcca
cgtctttggaccctgttccagaaaaacattatcgacaaggtgggtttcgacaagctcaac
ttcctgctcaagctgcccctcatcagctatctggtaaaacgcaaaattcacaagggactt
ggcctggataagtgccgcttgctgggctcaggttctgcgcctatcccgccatcactcatt
cagtggtaccacagcatagggctgaatatctgcgaagcctggggcatgaccgaaaactgt
gcctactccatcatcaattatccctttgatgccagcaaaatcggtaccgtgggaaagccg
gtggaaggctgcctggtgcgccgcagcgaaagcggtgaactcatggtcaagagtcccggg
ctgatgagtggctactaccagcagcccgaagcctccgctgccgccttcgatgaagatggc
tttttccacaccggcgatctctgcgccatcgatgaagatggttgcgtcagcatcaccggc
cgggtgaaagacaactttaaaaccgccaagggcaagtacgtggccccagtgcctatcgag
cgcaagctggctcaggatccccatgtggagctgatttgcgtgattggctcgggtctgccc
caccccatcgcactggtgcaactgtcagacggtgccaccctgcaagcccgggaagaggtt
cgcgcttccatcaaggccaccctggatgcggtgaatcctcatctggaatcccacgaaacc
gtggatgccgtggtggtagtcaacgccccctggaccattgaaaacgatgtgctcacccca
acgctgaaaatcaaacgccatgtgctggaagccagatacagtgccaaggtagatggcgtt
cgtggtgccaaggtggtgtgggaagacgagatttaa
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