Shewanella amazonensis: Sama_2059
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Entry
Sama_2059 CDS
T00445
Name
(GenBank) Isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
saz
Shewanella amazonensis
Pathway
saz00020
Citrate cycle (TCA cycle)
saz00480
Glutathione metabolism
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
saz01200
Carbon metabolism
saz01210
2-Oxocarboxylic acid metabolism
saz01230
Biosynthesis of amino acids
Module
saz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
saz_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sama_2059
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sama_2059
Enzymes [BR:
saz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Sama_2059
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
ABM00265
UniProt:
A1S7A8
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All DBs
Position
complement(2493959..2496184)
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AA seq
741 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPILQTFAEPAGVKIETRDISLSGRVIATFPEKLTD
AQRIGDHLAELGELATKPEANIIKLPNISASIPQLKACIKELQAQGYDIPNYPEEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKNPHSMGKWASDSKSHVSHMEA
GDFYGSEQSVTLADADSVSIVHTSKAGVETVLKSGLKLQAGEIIDSAVMSKNALVAFFER
EIEAAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFFKPLFAKHAETFERLGVDVNNGFG
DVVAKIQSLPEAERAAIEADIQAVYAERPAMAMVNSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLKDTKFMIPDRCYAGVYDATINFCKAHGAFDPRTMGTIPNVGLMAQKAE
EYGSHDKTFEIAEDGVVTVVNAAGSVLMSHTVEAGDIFRMCQVKDAPIQDWVKLAVRRAR
LSETPAVFWLDKNRAHDAELIKKVEAYLPQHDTSGLEIHIMSPVEATQFSLARMKDGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVEQVQSENY
LRWDSLGEFLALAASFEHLAQTAGVAKAQVLADTLDTAIGKFLDENKSPARRVGQIDNRG
SHFYLAMYWAQALAAQTADAELAAHFGQLADKLAANEETILAELIGVQGHSVDLGGYYRP
DFAKASAVMRPSATLNGLMSH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataattccccaacgattatttacactgaaaccgatgaggcgccagcactcgct
accctgtccctgctgcctatccttcagacatttgccgagccagccggcgtgaagatcgaa
acccgcgacatctctctgtccggtcgcgttattgctacttttcctgagaagctgaccgat
gcccagcgcattggcgatcacctggctgaactgggcgaactggccaccaagccagaagcc
aacatcatcaagctgccaaacatctctgcttctatcccacagctcaaagcctgtattaaa
gagctgcaggctcagggttatgacatccctaactatcctgaagagccaaagactgatgaa
gagaagtctatcaaggcccgttacgacaagattaaaggcagtgcagtaaaccctgtactg
cgtgaaggtaactccgaccgccgtgcgccgctgtcagtgaaaaactatgcccgcaagaac
ccacactccatgggcaagtgggcaagcgactccaagtctcacgtatctcatatggaagcc
ggtgatttttacggctctgagcagtctgtgacattggccgatgccgatagcgtcagcata
gtgcacaccagcaaagccggtgtggaaaccgttctgaaatcaggtcttaagctgcaagcc
ggtgaaatcatcgactcagctgtgatgagcaaaaatgccctggttgccttctttgagcgc
gaaatcgaagccgccaaggcagaagatgtgctgctgtcgctgcacctgaaagccaccatg
atgaaggtgtctgaccccatcatgtttggtcacgctgttaaagtgtttttcaagccactg
ttcgccaagcatgccgaaaccttcgaacgtctgggtgtggatgtaaacaacggttttggt
gacgtggttgccaaaatccagtctctgccggaagccgagcgcgccgccatcgaagccgat
atccaggccgtgtacgccgagcgtcctgccatggccatggtgaactctgacaagggcatc
accaacctgcacgtaccaagtgacatcatcatcgatgcctccatgcctgcggctatccgc
tcttcaggccagatgtggggcccggacggccagcttaaagacaccaagtttatgatcccg
gatcgctgctatgccggtgtgtacgatgccaccatcaacttctgtaaagcgcacggcgcc
ttcgatccccgcaccatgggtaccatccctaacgtgggcctgatggcgcagaaagccgaa
gagtacggcagccacgacaaaacctttgaaatcgccgaagacggcgtggtgactgtggtt
aacgcggcgggttctgtgctgatgagccacactgttgaagccggtgacatcttccgtatg
tgtcaggtgaaagacgcgccaatccaggattgggtgaagctcgccgttcgtcgcgcccgc
ttgtctgagactccagcggtgttctggcttgataaaaaccgtgcccacgatgctgagctg
atcaagaaggtggaagcctacctgccacagcacgacacctcaggtctggaaattcacatc
atgtctccggttgaagcaacccagttctcgctggcgcgcatgaaagatggcaaagacacc
atctcagttaccggtaacgtactgcgtgactacctgactgacctgttccccatccttgaa
ctcggtaccagcgccaagatgctgtcgatcgtgcctttgatgaatggcggcggtctgttt
gaaaccggtgccggtggcagcgcgcccaagcacgttgagcaggttcagagcgaaaactac
ctgcgttgggattcactgggtgagttcctggcactggctgcatctttcgaacacctggcc
caaaccgccggtgttgccaaggcgcaggtgctggccgataccctggatactgctatcggt
aagttcctggacgaaaacaagtcaccagcccgtcgtgtaggtcaaatcgacaaccgtggc
agccacttctacctggccatgtactgggctcaggcactggccgcgcaaactgccgatgcc
gagcttgctgctcacttcggtcagttggctgataagcttgctgccaacgaagaaaccatt
ttggcggagctgattggtgtacagggccacagcgtggatctcggcggttactatcgtcct
gattttgccaaggcaagtgcagtaatgcgcccaagcgcgaccctgaacggcctgatgagc
cactga
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