Sphingobium fuliginis KK22: H5V43_15510
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Entry
H5V43_15510 CDS
T06985
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5V43_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_15510
Enzymes [BR:
sbar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H5V43_15510
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H5V43_15510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QOT71463
UniProt:
A0A7M2GFT5
LinkDB
All DBs
Position
1:complement(3204089..3205486)
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AA seq
465 aa
AA seq
DB search
MYRARLNGPDDFDGWRDAARALTLAGIAPADIVWQDGEGAGDLFAADEPLPVASGAAFSV
PRAFVELAETAILHRDPERFALLYALLARLRDRPASLEDRADPLVRRVESLAKAVRRDMH
KMRAFVRFRELADAQGPRFVAWFEPDHHIVRANAGFFVRRFASMRWSILTPELSIHWDGD
ALTEGPGATRRDAPGDDPVEDIWKGYYAAIFNPARLKVGAMLSEMPRKYWRNLPEAALIP
ELVAGAQTREAAMIATPPKPAARRGNAATAWSALREEAMGCTRCPLYRDTTQTVFGEGPV
DAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDRALEEAGIDRRRAYITNAVKHFKHERRGK
RRIHQTPETPEIQACRWWLTQELELVRPRIIVALGATAGRALLGKAVTISRVRGAPLALE
GGAQGWITVHPSYLLRVPEETRKAEERKRFVEELREIGERVKALV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcgcaaggctgaacggcccggatgatttcgacggctggcgcgacgcggcccgc
gccttgacgctggcaggcatcgcgcccgccgacatcgtctggcaggacggcgagggcgct
ggcgacctcttcgccgccgacgaaccgcttccggtcgcaagcggagccgccttctccgtc
ccgcgcgcctttgtcgagctggcggaaacggcgatcctgcaccgcgatccggaacgtttc
gccctgctctacgccttgctcgcccggttgcgcgaccgccccgccagcctggaagatcgc
gccgatccactggtccggcgcgtggaatcgctggccaaggccgtgcggcgcgacatgcac
aagatgcgcgccttcgtccgcttccgcgaactggccgacgcgcaggggccgcgcttcgtc
gcctggttcgaaccggaccatcatatcgtccgcgccaatgccggattcttcgtgcggcgc
ttcgcctcgatgcgctggtcgatcctgacgcccgaactcagcatccattgggacggcgat
gcgttgaccgagggaccgggcgccacgcgcagggatgcgccgggcgacgatcccgtcgag
gacatctggaagggctattatgcggcgatcttcaatccggcgcggctcaaggtcggcgcg
atgctgtccgaaatgccccggaaatattggcgcaacctgccagaggccgcgctcattccc
gaactggtggcgggcgcccagacaagggaggcggccatgatcgcgaccccacccaaaccc
gccgcccgccgggggaacgccgccacggcctggagcgcgctgcgcgaggaggcgatgggc
tgcacccgctgcccgctctaccgcgacacgacgcagacggtgttcggggaggggccggtc
gatgcgccgctgatgttcatcggggaacagccgggcgatcaggaggatctggccgggcgc
cccttcgtcgggccggccgggcaattgttcgaccgcgcgctggaagaggccgggatcgac
cgccggcgcgcctacatcaccaacgccgtcaagcatttcaagcatgagcgccggggcaag
cggcgcatacaccagacgccggaaacgccggaaatccaggcctgccgctggtggctgacg
caggagctggagctggtccgcccccggatcatcgtcgcgctgggcgccacggcggggcgc
gcgctgctggggaaggcggtgacgatcagccgggtccgtggcgcgccactagcgctggag
ggcggcgcgcagggctggatcacggtgcatcccagctatttgctgcgggtgcccgaagag
acgcgcaaagccgaggagagaaagcgcttcgtagaggagttgcgggagattggagaacgg
gtgaaggcgctggtctag
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