KEGG   Streptomyces bathyalis: G4Z16_03295
Entry
G4Z16_03295       CDS       T07305                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sbat  Streptomyces bathyalis
Pathway
sbat03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sbat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G4Z16_03295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbat03400]
    G4Z16_03295
Enzymes [BR:sbat01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G4Z16_03295
DNA repair and recombination proteins [BR:sbat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G4Z16_03295
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: QPP05577
UniProt: A0A7T1WR06
LinkDB
Position
737342..738256
AA seq 304 aa
MRSRERSTRRGVRDIEISRPEKVLFPDDGITKSELAEHYRRVASRAIPRLRGRALMMERH
PDGIGGKPLMQKNAPDYFPDWVHTAELPKENGTVRHVVCDNADTLVYLAGQACITTHRWM
SRTDRPHHPDLLVFDLDPSGDADFEDVRWAASCVGGLLEVVELPTQLMTTGSRGLHVIAA
LDRKSDFDSVREFARRVARVLVARHPGRLTDEPRKADRGDRIYLDIQRNAYAQTAVAPYS
VRARPGAPVATPIGWSELDDRKLRPDRWNVRNIADRLREDDPWDGTATRGRSVRAADRRL
SARI
NT seq 915 nt   +upstreamnt  +downstreamnt
ttgcgctccagggagcggtcaactcgtcgcggcgtgagagacatcgagatcagcagaccg
gagaaggtgctcttcccggacgacggcatcaccaagagcgaactcgccgagcactaccgg
cgcgtggcctcccgcgccataccacggctgcgcggccgtgccctgatgatggagcgccat
ccggacggcatcggcggcaagcccctgatgcagaagaacgcccccgactacttccctgac
tgggtgcacaccgccgaactgcccaaggagaacggcacggtgcggcacgtggtgtgcgac
aacgccgacaccctggtgtatctcgccgggcaggcgtgcatcaccacgcaccgctggatg
tcgaggacggaccggcctcaccatccggacctgctcgtcttcgacctggaccccagcggc
gacgcggacttcgaggacgtgcggtgggcggcgtcgtgcgtgggcggacttctggaggtt
gtcgagttgccgacgcagctgatgacgacgggctcgcgcggcctgcacgtcatcgccgcc
ctcgaccgcaagtcggacttcgactccgtgcgggaattcgcccgcagggtcgcccgtgta
ctggtggcgcgccaccccggacggctcaccgacgagccccgcaaggccgaccgcggcgac
cgcatctacctggacatccagcgcaacgcctacgcgcagacggccgtcgctccctactcg
gtgcgtgcacgtcccggcgcacccgtcgccacgccgatcgggtggtcggagctggacgac
cggaagctgcgccccgaccggtggaacgtccgcaacatcgccgacaggctgcgcgaggac
gacccgtgggacggaacggccacccggggccggtcggtgcgggcggcggacaggcgcctg
tcggcgaggatctga

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