Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E0085
Help
Entry
SbBS512_E0085 CDS
T00700
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc00470
D-Amino acid metabolism
sbc00550
Peptidoglycan biosynthesis
sbc01100
Metabolic pathways
sbc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SbBS512_E0085 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SbBS512_E0085 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SbBS512_E0085 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbc01011
]
SbBS512_E0085 (ddlB)
Enzymes [BR:
sbc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SbBS512_E0085 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbc01011
]
Precursor biosynthesis
Amino acid ligase
SbBS512_E0085 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_YheCD
TTL
ATPgrasp_ST
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACD06923
UniProt:
B2U297
LinkDB
All DBs
Position
93202..94122
Genome browser
AA seq
306 aa
AA seq
DB search
MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI
ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLDASQEANLQAL
VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaatcgcggtcctgttgggcgggacttccgctgagcgggaagtttctctg
aattctggcgcagcggtgttagccgggctgcgtgaaggtggtattgatgcgtatcctgtc
gacccgaaagaagtcgacgtgacgcaactgaagtcgatgggttttcagaaagtgtttatc
gcgctacacggtcgcggcggtgaagatggtacgctgcagggcatgctcgagctgatgggc
ttgccttataccggcagcggagtgatggcatctgcgctttcaatggataaactacgcagc
aaactgctgtggcaaggtgccggtttaccggtcgcgccgtgggtagcgttaacccgcgca
gagtttgaaaaaggcctgagcgataagcagttagcagaaatttctgctctgggtttgccg
gttatcgttaagccgagccgcgaaggttccagtgtgggaatgtcaaaagtagtagcagaa
aatgctctacaagatgcattaagattggcatttcagcacgatgaagaagtattgattgaa
aaatggctaagtgggccggagttcacggttgcgatactcggtgaagaaattttaccgtca
atacgtattcaaccgtccggaaccttctatgattatgaggcgaagtatctctctgatgag
acacagtatttctgccccgcaggtctggatgcgtcacaagaggccaatttgcaggcatta
gtgctgaaagcatggacgacgttaggttgcaaaggatggggacgtattgacgttatgctg
gacagcgatggacagttttatctgctggaagccaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcacgtcaggcaggtatgagcttctcgcagttggtagtacga
attctggaactggcggactaa
DBGET
integrated database retrieval system
