Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4491
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Entry
SbBS512_E4491 CDS
T00700
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbc03032
]
SbBS512_E4491 (hupA)
03036 Chromosome and associated proteins [BR:
sbc03036
]
SbBS512_E4491 (hupA)
03400 DNA repair and recombination proteins [BR:
sbc03400
]
SbBS512_E4491 (hupA)
DNA replication proteins [BR:
sbc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SbBS512_E4491 (hupA)
Chromosome and associated proteins [BR:
sbc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SbBS512_E4491 (hupA)
DNA repair and recombination proteins [BR:
sbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SbBS512_E4491 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ACD09930
UniProt:
B2TWI7
LinkDB
All DBs
Position
4201138..4201410
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AA seq
90 aa
AA seq
DB search
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa
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