Sphingobium baderi: ATN00_12230
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Entry
ATN00_12230 CDS
T04194
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbd03036
]
ATN00_12230
Chromosome and associated proteins [BR:
sbd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
ATN00_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
ALR20952
UniProt:
A0A0S3EZT4
LinkDB
All DBs
Position
complement(2488081..2492421)
Genome browser
AA seq
1446 aa
AA seq
DB search
MTSTRSAALAAVPPCAAPSLTDIADKLLAAAQLILPHLEAGRAVDARALRDAMETAFGGS
DAEGVWDWKSAYDACEAVQILFLRKYATPLFRKHADPQNRLALIEKIAALMPTHTRRSES
SQALQQFSTPAGLAYVAGVAASMYSHDLVLEPSAGTGLLAVQAEIAGARLALNELADLRA
ALLPRLFSGVVTTTHDAAHIHDNLDPAIVPDVVVMNPPFSAMVNVDKRMKDTALRHIRSS
LARLRPGGRLVAITGAGCAPDNPEWTDAFAALQDNGRVLFSAAIDGRAYRKHGTTIDTRL
TVIDRIPADDPRQFPQAPGVAPDTATLLAWVIEQVPPRAPAPDTPPAAPFAIQTMTKKPV
ARPVKRTVAATITVDREDAKELQYETCDWTPSGPGTLTDAIYEPYALQSTRIPGAKPHPT
PLVQSAAMASVAPPRPGYCPMLPRRLVADGVLSDAQLESIILAGEAHSDHLAGAWTVDQH
WDVVTAAADDAGNAIRFRRGWMLGDGTGAGKGRQVAGIILDNWLRGRRRAVWVSRSETLH
EDAMRDWEALGQERLLVTPLSRFRQGTPITLDEGILFVTYATLRSQERGDKASRVRQIVD
WLGAGFDGVIVFDESHAMANAAGGKSERGDQAPSQQGRAGLRLQHALADARIVYVSATGA
TTVQNLAYAQRLGLWGGADFPFATRGEFISAVDNGGVAAMEVLARDLKALGLYSARSLSF
DGVEYEMVEHDLTPAQIKIYDAFADAFQVIHNNLDAAMRAANSNLNSQAKSAARSAFESA
KQRLFNHLITSMQTPAVVASIERDLAAGHAAVVQIVSTGEALLERRLADIPTDEWDDIRV
DITPREYALSYLEHSFPVQLYEMFTDSEGNLSSRPVTDAEGNPVISREAEARRDQMIERI
ASLAPVPAALDQIIHHFGTDMVAEVTGRSRRIVKRHGSDGFDRFVVENRPGSANIAETDA
FQSDFKRILVFSDAGGTGRSYHADFGARNQRLRVHYLLEAGWKADSAIQGFGRTNRTNQK
QPPLFRPVTTNVKAQKRFISTIARRLDSLGAITRGQRQTGGQGLFRPEDNLESWYARDAL
RQLYRLIHGGKVEGCSLDRFEAATGLTLGDAAGLKDDLPPITTFLNRMLALTIELQNILF
TVFEDLLSARIEGAIASGTYELGLETLQAESFAIADAAVIYTHPGTSAQTRLLTIERQDR
NRPLTVDEAFDHLSDRRARLLVNAQSGRAAVQIPTRALQLEDGSMEKRIRLVRPMESTPV
PLAAMADTHWTEADRAAFARCWEAELAEIPEFRTSTMHIVTGLLLPIWKQLPEDSTRVYR
LQTDAGERIVGRRVSPAWAASATAKDNAPIALSPEAAHRALSDGQAILRLSEGLQLRRAR
VMTVNRIELEGFDEGMRDRLKAMGLISEIISWKLRLFVPIGADGVPVLARLLECYPLRQI
GERHAA
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacccgttccgcggcgcttgccgccgttccgccttgcgccgctccttcgttg
accgacatcgccgacaagctgcttgctgccgcacagctcattctcccccatctggaagcc
ggacgcgcggtagatgcccgcgccttgcgcgacgcgatggagacggccttcggcggttcc
gatgccgaaggcgtctgggactggaagtcggcttacgacgcctgcgaggccgtgcaaatc
ctgtttctgcgtaaatacgccactccgcttttccgtaagcacgccgatccgcaaaaccgg
ctcgcgcttatcgaaaaaatcgccgcgcttatgccgacccacacgcgccgctcggaatcg
tcgcaggcgcttcagcaattctcgacgcctgcgggccttgcctatgtcgcgggcgttgct
gcctccatgtattcgcatgatcttgtgctggagccgtccgccggcactggactgctcgcc
gtgcaggccgagatcgctggcgcccgcctggcgctcaacgaactggcggacctgcgcgcg
gcgctgctcccccgtctgttctccggcgtcgtcaccaccacgcatgacgccgcccatatc
catgacaatctcgatccggcgatcgtgccggacgtggtggtgatgaacccgcccttcagc
gcgatggtcaatgtcgacaagcgcatgaaggacacggcgctgcgccatattcgctcgtcg
ctggcccgtctgcgtcccggaggccggctcgttgcgatcaccggcgcgggctgcgcgccc
gacaatcccgaatggaccgacgcctttgccgcgcttcaggacaacgggcgcgtgctgttt
tcagccgcgatcgacggccgcgcctatcgcaaacacggcaccacgatcgatacgcgcctc
acggtgatcgaccggattcccgccgatgatccccgccagttcccgcaagcgccaggcgtt
gcgcccgataccgccactttgctggcctgggtgatcgaacaggtgccgccgcgcgcaccc
gcgccggatacaccacctgccgcaccgttcgccatccagacaatgacgaagaagccggtc
gcgcgtccggtgaagcggaccgtcgcagcgaccatcaccgtggaccgcgaggatgcgaag
gaactccagtatgaaacgtgcgactggacgccgtccggtccgggcacgctgaccgacgcg
atctacgaaccctatgcccttcagtcgacccgcatccccggcgcaaagccgcatccgacc
ccgctggtgcaatccgccgcaatggcgtcggtcgctccgccccggccgggctattgcccg
atgctgccccggcgtctcgttgcggacggcgtgctgtccgacgcccagctcgaatccatc
attctcgccggcgaggcccatagcgatcacctcgccggggcgtggaccgtcgatcagcat
tgggatgtggtgacggcggccgcggacgatgccgggaacgccattcggtttcgccgtggc
tggatgctgggcgacggcaccggggccggcaaaggccgccaggtcgccggcatcattctc
gacaactggctccggggtcgccgtcgcgccgtctgggtcagccgttcggaaaccctgcat
gaagacgcgatgcgcgactgggaagcgctcggtcaggagcgtttgctggtgacgccgctg
tcgcgcttccggcagggcacgccgatcacgctcgatgaaggcatattgttcgtcacctat
gcgaccctgcgctcgcaggaacgcggcgacaaggcgagccgcgtccggcagatcgtcgat
tggctcggcgccggtttcgacggagtcattgtcttcgacgaatcccatgcgatggccaat
gccgctggcggcaaaagcgagcgcggcgatcaggcgccctcgcagcagggccgagcgggc
ctcaggctccagcacgcgctggccgatgcccgcatcgtctatgtctccgccaccggcgcg
accaccgtgcagaatctcgcctatgcccagcgcctcggtctgtggggcggcgcggatttt
cccttcgccacgcgcggcgaattcatctccgctgtcgataatggcggcgtcgcggcgatg
gaggtgctggcacgcgacctgaaggcgctcggcctctattcggcgcgttcgctctcattc
gacggcgtcgaatatgagatggtcgagcatgatctgactccggcgcagatcaagatttac
gacgccttcgccgacgccttccaggtcatccacaataatctcgacgcggcgatgcgcgcc
gccaacagcaatctcaactcccaggccaaatccgccgcgcgcagcgcgttcgaatccgcg
aagcagaggctgttcaaccacctcatcacttcgatgcagacgcccgccgtcgtcgccagc
atcgagcgggatctcgcggccggccacgccgctgtggtgcagatcgtctcgaccggcgaa
gcgcttcttgaacggcggctcgcggacattccgaccgatgagtgggatgatatccgggtc
gatatcacgccccgcgaatatgctctgtcctatctcgagcatagcttcccggtgcagctc
tacgagatgttcaccgacagcgagggcaatctctcctcccggccggtcacggacgccgag
ggcaatcccgtcatctcgcgcgaggccgaggcgcggcgcgaccagatgatcgaacggatc
gcgtcgctggcgccggttccggccgcgctcgaccagatcatccatcatttcggcaccgat
atggtggccgaagtgacgggccgctcgcgccgtatcgtcaagcgtcacggttcggacggg
ttcgaccgcttcgtcgtcgagaaccgccccggctcggccaacatcgctgaaaccgacgcc
tttcagagtgatttcaagcgcatcctcgtgttcagcgacgcgggtggcacgggacgcagc
tatcatgccgatttcggcgcgcgcaatcagcggctgcgcgtccattatctgctcgaagcg
ggctggaaggccgacagcgcgatccagggtttcgggcggaccaaccgcaccaaccagaag
cagccgccgctgttccgccccgtgacgaccaatgtgaaagcgcagaagcgcttcatctcg
accatcgcccggcgcctggattcgctcggcgccatcacgcgcggccagcgccagaccggc
ggccagggcctgttccggccggaggataatctggaatcctggtatgcgcgcgacgcgctg
cgccagctctaccggctgatccatggcggcaaggtcgaaggctgctcgctcgaccggttc
gaggcggcgacgggattgacgctcggtgatgcggccggtctcaaggacgatctgccgccg
atcaccaccttcctcaaccggatgctggcgctgaccatcgagcttcagaacatcctgttc
acggtgttcgaagacctgctctcggcccgcatcgagggtgcgatcgcatctggcacctat
gagctgggtctggagacgcttcaggccgaaagcttcgccatcgccgacgccgcggtcatc
tacacgcaccccggcaccagcgcccaaacccggctgctgacgatcgaacgccaggatcgc
aaccgcccgctcaccgtcgacgaagcctttgaccatctcagcgaccggcgggccagattg
ctggtcaacgcacaatcgggccgtgccgccgtgcagattccgacacgcgcgctccaactg
gaggatggcagcatggagaagcgcatccggctcgtgcgtccgatggaatcgacgccggtg
ccgctggcggcgatggccgatacccactggacagaggccgaccgcgccgcgttcgcccgt
tgctgggaagccgagcttgccgagatcccggagttccgcaccagcaccatgcacatcgtc
accggcctgctcctgccgatctggaagcagcttcccgaagactccacgcgggtctatcgg
ctccagaccgacgcgggagagcgtattgtcggccgccgcgtatcgcctgcctgggcggcg
tcagccaccgccaaagacaatgcgccgatcgcgctttcgccggaggccgcgcaccgcgca
ttatccgatgggcaggccattctgcgcctgtcggaggggcttcaactgcgccgcgcccgc
gtcatgactgtcaatcggatcgaactggagggtttcgacgaggggatgcgcgatcggctc
aaggccatggggctgatctccgagatcatctcgtggaagctgcgcctgttcgtgccgatc
ggcgccgacggcgttcccgtgcttgcccgtctgctggagtgttacccgctccggcagatc
ggcgaacgccacgcggcgtaa
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