Salmonella bongori NCTC 12419: SBG_3878
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Entry
SBG_3878 CDS
T01579
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbg03000
]
SBG_3878 (treR)
Transcription factors [BR:
sbg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SBG_3878 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
MarR
HTH_Crp_2
HTH_AraC
HTH_28
CENP-B_N
AAA_18
TrmB
HTH_26
HHH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CCC32920
UniProt:
A0A0K0HHL7
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All DBs
Position
complement(4322876..4323823)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVAEHLGMLKRRNID
GVVLFGFTGITEELIAPWQASLVLLARDSAGFASVCYDDEGAIHLLMQRLYEQGHRNISF
LGVPHSDVTTGKRRHDAYLAFCKKHKLHPVASLPGLAMKQGYEHTASVIMPDTTALVCAT
DTLALGASKYLQEQRIETLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAASQLIEQIN
GRCDPRRIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctcactattaaagacatcgcccgcctgagcggcgtaggaaaatcaacg
gtttcccgcgtactgaataatgaaagcggcgtcagcgagcgtacccgcgaacgtgtcgaa
gcggtgatgaatcaacatggtttctccccttcccgctccgcccgcgcgatgcggggacaa
agcgataaagtcgttgctattatcgtcactcgccttgattcgttgtctgaaaacctcgcg
gttcagaccatgctgcctgcgttttatgagcagggctacgaccctattatgatggaaagt
cagttctcaccgacgctggtcgccgagcatctgggaatgctcaagcgacgcaacatcgat
ggcgtggtgctgtttggctttaccggcatcacagaagagctgatcgccccctggcaagct
tcgttggtactgctggcaagggattcggcaggttttgcctccgtctgttacgacgacgag
ggcgcgattcatctccttatgcagcgactgtatgagcagggccaccgcaacattagtttc
ctgggggttccccatagcgacgtcacgaccggcaaacgtcggcatgacgcatacctggcg
ttttgtaaaaaacacaaacttcatcccgtcgcctccctgcccggcctggccatgaagcag
ggttatgagcacacggcgagcgttatcatgccggataccacggcgttagtctgcgccacc
gatacgctggcgctgggcgccagtaagtatttgcaggagcagcgtattgagacactgcaa
ctggcaagcgtaggtaatacgccgctgatgaaattcctgcacccggagatcgttactgtc
gatccaggctatgctgaagccggacggcaggcagcttcgcagctgatcgaacagatcaat
ggccgctgcgatccgcgccggatcgtcattccatcaaccctcgcctga
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