Streptomyces bingchenggensis: SBI_03398
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Entry
SBI_03398 CDS
T01678
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbh
Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbh03016
]
SBI_03398 (truB)
Enzymes [BR:
sbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SBI_03398 (truB)
Transfer RNA biogenesis [BR:
sbh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SBI_03398 (truB)
Prokaryotic type
SBI_03398 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Peptidase_A21
Motif
Other DBs
NCBI-ProteinID:
ADI06519
UniProt:
D7CAG2
LinkDB
All DBs
Position
complement(4428359..4429282)
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AA seq
307 aa
AA seq
DB search
MTRKGRAGSTAPDGLVIVDKPAGFTSHDVVAKMRRFAGTRRVGHAGTLDPMATGVLVIGV
EKATRLLGHLALTEKGYSATIRLGQTTVTDDAEGEITSSAGVAGTALTAVEAVEAGIAAL
TGDIMQVPAKVSAIKIDGKRSYARAREGEDFEIPARPVTVSSFTLHAHREAKAEDGTPVL
DLDVNVVCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLAAARTLPQLEESLQVM
PIADAAAAAFPRWDVDEDRARLLGNGVRIGMPAREETGPVAVFGPEGRFLALVEEHKGKA
KSLAVFA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaagggacgggccggctccacggccccggacggcctggtgatcgtcgacaag
ccggccggcttcacctcacacgacgtcgtggccaagatgcgccgcttcgccgggacccgg
cgggtcggccacgccgggacgctggaccccatggccacgggcgtgctcgtgatcggcgtg
gagaaggccacccggctgctcgggcacctggcgctgaccgagaagggttactcggcgacc
atccggctcggccagacgaccgtcacggacgacgcggagggggagatcacctcctccgcc
ggcgtcgccgggacggctctgaccgcagtcgaggccgtcgaggccgggatcgccgcgctg
accggggacatcatgcaggtgcccgccaaggtcagcgcgatcaagatcgacggcaagcgc
tcctacgcacgggcgcgggagggcgaggacttcgagatcccggcgcggccggtgaccgtg
tcgtccttcaccctccacgcgcaccgcgaggccaaggcggaggacggcacccccgtcctc
gacctggacgtcaacgtggtgtgctcctcgggcacctacatccgggcgctggcccgcgac
ctgggcgccgggctgggcgtcggcggtcatctgaccgcgctgcggcgcaccagggtcggt
ccgtacgggctggccgccgccaggacgctgccgcagctggaggagtcccttcaggtcatg
cccatcgccgacgccgcggccgccgccttcccgcgctgggacgtcgacgaggaccgggcc
cggctgctgggcaacggtgtacggatcggtatgccggcgcgggaggagaccgggcccgtg
gcggtcttcgggccggaggggcgctttctggccctggtggaggagcacaagggcaaggcg
aagagcctggccgtgttcgcctga
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