Sorghum bicolor (sorghum): 110431277
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Entry
110431277 CDS
T01086
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110431277
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
110431277
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110431277
03036 Chromosome and associated proteins [BR:
sbi03036
]
110431277
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110431277
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110431277
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110431277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
Cnd1
SCD
CLASP_N
TAF6_C
Adaptin_N
CEP104-like_TOG
V-ATPase_H_C
DUF3102
Motif
Other DBs
NCBI-GeneID:
110431277
NCBI-ProteinID:
XP_021305894
LinkDB
All DBs
Position
10:1645265..1651510
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DIVDWFIPVVKRLAAGEWFTARVSSCGLFHIAYPSASDQLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQNHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQISIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVEKTVKPCLVELSEDPDVDVRYYANQALQACDQMMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgaacctctgtatccaattgctgtactgattgacgagctgaagaat
gaggacattcagttgcgtctaaactccattagaagactttcgacaattgcacgggctctt
ggagaagaaagaaccaggaaggaactgattccctttctcagtgaaaacaatgacgatgaa
gatgaggttcttcttgcaatggctgaggaattgggtgtcttcattccttatgttgggggc
gtagaacatgctcatgttttgcttccacctttggagacattgtgtacagtggaggaaact
tgtgtccgcgataaggcagttgaatctctgtgccgtattggtgcacaaatgaaggaatct
gacattgtcgactggttcattccagtagtaaagaggctagcagctggcgagtggtttaca
gctcgtgtatcatcctgtggtctgttccacatagcctatccaagtgcgtcggaccaattg
aaaacagaattgaggactatctatggtcagttatgtcaggatgacatgcctatggtcaga
agagcagctgcatcaaatcttggaaaatttgcagccacagttgaacagaatcatttgaag
acagaaataatgtcaatatttgatgacttaacccaagatgatcaagattcagtgcgtttg
ttggctgttgaaggctgtgctgctcttggtaaattgttggaaccacaagattgtgtagca
cacattcttcctgtcattgtcaatttctcccaggataaatcatggcgtgttcgttatatg
gttgccaatcaattatatgagctctgtgaggctgttggccctgagcctacaagagctgat
ttggtgcctgcatatgttcgactccttcgtgataatgaggctgaagtgcggatagcagct
gctggaaaagtaactaagttctgtcgcatattaaatccacagatttcaatccaacatatt
cttccgtgcgttaaggaattgtcatcagattcatcccagcatgttcgttcagctttagcc
tcagtcattatgggaatggcccctgtactgggcaaggatgctaccattgagcagcttctt
ccaattttcctctctttgctgaaggatgaatttcctgatgttcgacttaacataatcagc
aaacttgatcaagttaatcaggttattggaattgacctgctatcccaatcactgctacca
gccattgtagaacttgcggaggataggcactggagagtccggcttgcaataattgagtac
atcccattgttggcgagtcagttaggtgttgggttttttgatgacaagctgggggcactc
tgcatgcaatggttggaagataaggtctattcaatcagagatgctgccgctaacaacttg
aagcgccttgcagaagagtttggtccagagtgggcaatgcagcatataattcctcaggtg
ctggagaagatcaacaatccacactatttgtaccgcatgacaattctgcaggctatctcc
ttgctagctcctgtcatgggtgcagaaatcacttgtcaaaagctgcttccagttgtcatt
aattcttcaaaggacagggttcctaacattaagttcaacgttgcaaaagtactacagtca
cttgtaccgatcctcgatcaatctgttgtggagaagaccgtgaaaccatgccttgttgag
ctcagcgaggaccctgatgttgatgtaagatactatgcaaatcaggcactgcaggcgtgc
gatcaaatgatggtgtcaagctaa
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