Sorghum bicolor (sorghum): 110434864
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Entry
110434864 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC110434864
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
RVP_2
Retrotrans_gag
Asp_protease_2
gag-asp_proteas
Asp_protease
DUF5813
Motif
Other DBs
NCBI-GeneID:
110434864
NCBI-ProteinID:
XP_021315305
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All DBs
Position
4:complement(68015120..68018746)
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AA seq
1208 aa
AA seq
DB search
MDPNVLSLCDEILERIDRLRDDSGERWERWERRFEEVTTERQEHDEAVDRRIKSLEDFAA
AQYTAAVVSDNWGAHFDERVSDLEQRMMDLELIRIHEINDERDDRVAAVEGAVGEINDWR
PGVDGLIDALRWEVKKLRASGGGAVEALPTSGPLHQHGLVAARSPAGTTTDWPKGHGVES
TTRAKSYGVVTTVAPTPANGMCRSSRPPLPPNPTFTVVECHPNFSPDPLPPDPPFHSPHL
GQLPKMHFPQFDGTTPQLWITHAESYFDMYSVDPSVWVRVASMQFVGPGKRWIQSIAHRL
AQVSWTEFCILLRERFCRDQHELLLRQLFNIRQTASVQEYADQFVDLVEQLSAYSTHPDT
LSYTTRFIDGLRDDIRSVVLIQRPVDLDSAVSLACLQEEAVEPSRRHQYRRADAPAQHKS
ASSRAPLQLGAPPQRMALPDPPAPSESRRPPDDRRQEHRRTSVDDKLQSLRSYRKARGLC
MRCGEKWHHGHKCSPALQLHALQEVWDLCEDLFTEDSHTELDDTPAEDHSFMLLSAAAVS
QTFHPRTLQFAGKIQGHNINILLDSGSTNSFLDANFAEKLSGVTSLSAPTTVKVADGGAV
PCTSHIPYAEWSIQGYTFHSTLKFIPIGSYDMILGMDWLQAFSPMKVHWLQRWVQIPYGP
DNIILQGALPEQMGCSLVSVNLLPAEETVSVSDLPSVPPEIQSLLQQYSHLFQVPAELPP
RRACDHTIPLVQGAQPVSARPYRYSPALKTEIETQVNDMLQNGFIRPSTSAFSSPVLLVR
KKDNSWRFCVDYRQLNALTVKSKYPIPVIDELLDELSGASWFSCLDLRAGFNQIRLAPGE
EHKTAFPTHCGQFEYTVMSFGLTGAPNSFQGAMNTTLHPLLRKCVLVFFDDILVYSATYA
DHVQHLAQVFELLSQDQWLVKLSKCSFAKQSINYLGHVVSAAGVSTDPTKIAAVQAWPTP
TDVKQLRSFLGLTGYYRKFVQHYAVIARPLTDLLKKGTLFIWTLNHTTAFNTLKQALTEA
PVLALPDFCKPFQLQTDASDTGVGAVLLQNGHPLAFVSKSLGPKTRGLSTYEKEYLAILI
AVDQWRSYLQHAEFTIFTDQRSLMHITEQRLQTPWQMKLYTKLVGLQFQVVYKPGVSNLA
ADALSRHPDPPEHLNAISAPSHSWLADVAAGYNFDPFSKKLLQDLAVDSASHPPYTLLQG
IIHIGDRI
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacgtgctctccctctgcgatgagatcctcgagcggatcgatcggctccgc
gacgactccggcgagcgttgggagcggtgggagcgccgcttcgaggaagtcaccaccgag
cgccaggagcatgacgaggccgtagatcgacggatcaagtcgctggaggacttcgcagcc
gcgcagtacaccgccgcggttgtctccgacaactggggcgcccacttcgacgagcgggtc
tccgatctcgagcagcggatgatggatctcgagctgatccgcatccacgagatcaacgac
gagcgggacgaccgtgtggctgccgtcgagggcgcggtcggcgaaatcaacgactggcgt
ccgggcgtggatggactcatcgacgcccttcgctgggaagtgaagaagctccgtgcaagc
ggaggtggtgctgtcgaggcgctgcccacatcgggccccctccatcagcacgggttggtc
gccgcgcgctcacctgccgggacaacgaccgactggcccaaggggcacggcgtcgaatcg
actacacgggcgaagagctacggtgtggtcaccaccgtagctccgaccccggccaatggt
atgtgccggagttcccgtcctcctcttcccccaaaccccaccttcactgtcgtggagtgc
caccccaatttttccccagatcccctcccacccgatccacccttccattcccctcaccta
ggccaattacctaaaatgcattttcctcaattcgacggtaccaccccacagctttggatt
acccacgctgaatcctattttgatatgtactctgttgatccgtccgtgtgggtgcgtgtc
gcttcaatgcagttcgttggtcctggcaaacgttggattcagtccatagcccaccgtctc
gcccaagtcagctggactgagttttgcatcctgctccgtgagcgtttctgccgcgatcaa
catgaacttctcctgcgccaactctttaacatccgtcagactgcttcagttcaggaatat
gccgatcaatttgtcgatctcgttgaacaactctcggcttactccacccacccagatact
ctctcctacactacccgttttatcgatggcctccgcgacgatatccgttcagtggttctt
attcagcgtcctgtcgatttggattctgctgtttccctcgcgtgtttgcaggaagaggcg
gtcgagccatcgcgccgtcaccaatatcgccgagcggatgcaccggcacaacacaagtcg
gcgtcctctcgggcgcccctgcagctgggagccccacctcagcgcatggcgttgcctgat
cctccagcgccatcggaatctcggcgtccacctgatgatcgccgccaagaacatcgccgt
acttcagtggatgacaagctgcagtcgctccgctcttacagaaaggcgcgcggtctctgt
atgcgctgtggtgagaaatggcaccacggtcacaaatgctccccagccctgcagctccat
gctcttcaagaagtttgggatctctgtgaagacttgttcaccgaagacagtcatacagaa
ttagatgatactccagctgaggatcattcttttatgttattgtcggctgctgcagtttcc
cagaccttccatccccgcacacttcagtttgccggcaaaatacaagggcacaatatcaac
attctgctggattcgggcagcacaaattctttcctggatgccaattttgcagaaaaatta
tctggagtgacatccttgtctgctccaaccactgtcaaagtggccgatggtggtgccgtt
ccttgcaccagtcatattccgtatgctgagtggtctatccagggatatacttttcattcc
accctcaagtttatacccattggctcatatgatatgattttgggtatggattggttgcag
gctttctcccccatgaaggtgcattggcttcagagatgggtccagattccctacggtcct
gacaatatcatattgcagggtgccttgcctgagcagatggggtgttctctggtgtctgtc
aacctcctgcctgcagaagaaactgtttcggtctcggatcttccttctgttccacctgag
attcagtctttgctccagcaatacagtcatttgttccaagttccagcagagctgcctcca
cgccgtgcttgtgatcacactataccgctggtccagggtgctcaaccggtgtctgcccga
ccatatcggtactctcctgccctcaaaactgaaattgaaacccaagtcaatgatatgtta
caaaatgggtttatcagaccaagtactagtgccttctcttctccggtgcttctggttcgg
aagaaagataacagttggcgtttttgcgtggattaccgccagctcaatgcattgacagtg
aaaagcaagtaccccattcctgttattgatgagcttctggacgagttgtcaggtgccagt
tggttctcttgcttagacctgcgggccgggttcaatcaaattcgcctcgcgcctggagaa
gaacacaagactgcattcccgacccactgtggacagtttgaatatactgtgatgtcgttt
gggttgacaggagctccaaactcgttccaaggggctatgaatacaacgctgcatcccctt
ctccgcaagtgtgtgctcgtctttttcgacgacattcttgtctacagcgccacgtatgca
gatcatgtccaacatttggctcaagtttttgaacttctttcccaggatcagtggctggtt
aaactgtccaagtgcagctttgctaagcagtccatcaactacttgggacatgttgtcagt
gccgctggggtttctacagatcctaccaagatagcagcagttcaagcttggcctactcca
actgatgtcaaacagctgcgcagttttctgggccttaccggctattatcgcaagtttgtg
cagcactacgcagtcatcgctcggccgttgacagacctactcaagaagggtaccctgttc
atttggactctcaaccatacgactgctttcaacactctgaagcaggcacttactgaggct
ccggtcctggctctgccagatttttgtaagccatttcagctccagaccgatgcaagtgac
actggagtgggtgcagttctcctgcagaatggacatcctctagcatttgtgagcaaatcg
ttgggacccaaaactcgtgggttatctacatatgagaaagagtacttggccattcttata
gctgtcgatcagtggcgatcttatttgcagcacgctgagtttactattttcactgatcag
cgcagtctcatgcatattactgagcaacgacttcagaccccttggcaaatgaaactctac
actaaattggttgggttgcagttccaggtcgtttacaaacccggggtctccaacttggcc
gcagatgctctgtctcggcatccagatccccccgaacatttaaatgctatctcagctccg
tcccactcttggctcgctgatgttgctgctggttacaatttcgatccgttctccaagaag
ctgctgcaagacttggctgttgactctgcaagtcaccccccctacaccttgctacaaggt
attattcatatcggagaccgcatctag
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