Sorghum bicolor (sorghum): 110437209
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Entry
110437209 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC110437209
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
Integrase_H2C2
Retrotrans_gag
RVP_2
Ty3_capsid
rve
RT_RNaseH
Asp_protease_2
gag-asp_proteas
Chromo
zf-H2C2
Asp_protease
RT_RNaseH_2
SKA2
Integrase_Zn
Motif
Other DBs
NCBI-GeneID:
110437209
NCBI-ProteinID:
XP_021321239
LinkDB
All DBs
Position
7:9257781..9269232
Genome browser
AA seq
1383 aa
AA seq
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MTEPSAADLLAAIKALTEDMATMKADMASLKKEKSESSAGGGGGGNRHAEGQHTDYPPKH
KKWDFPRFDGTTDPMLFLNKCEAYFRQHRTMAEERVWHASYNLEGVAQLWYNQLEEDSST
PTWARFKEYLHLRFGPPLRSAPLFELAECRRTGTVEEYSNRFKALLPRAGRLDEEQRVQL
YTGGLLPPLSHVVRLHNPDWLAVAMSLACQVELMEVERPPPPAPRAPARGILPAPAPRAA
LPPPPPPLALPAPLAAAQPGRGDGRRLSPEEMAERRRLGFCFNCNEKYTRGYNRFCRRIF
FLEGVEIDDAPDDVAAAEPDAEAPCFSLQAVAGVPVASTMQLRVSLGAATLVALLDSGST
HNFISAAAARRSGLPLRQRPRLTALVANGERVTCDGVIRDAPLLIDGVTFPTDLFVMPLA
GYDVVLGTRWLGVLGPIVWDLGSRRVTFQHLGRPVSWTGIACPAVPTLGVTSEVGPLLDA
LLHAYGGLFADPTGLPPKRAHDHRFTLKPDAQPVAVRPYRYPAAHKDELERQCAAMIEQG
IVRRSDSPFSSPVLLVKKPDGSWHFCVDYRAFNALTVKDAFPILVVDELLDELHGAKFFT
KLDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLEMVFGLCNAPATFQALMNDVLRPFLRR
FVVVFFDDILIYSRTWANHLRHLRAVLDELQRHQLFVKRSKCSFGAPSVAYLGHVISAAG
VAMDPAKVQAIHDWPAPRSVPAVRGFLSLAGYYRKFVHGYGALAAPLSALLKKEGFSWDD
AAASAFAALKDAITRATIQAVRHWRPYLWGRSFTVKTDHYSLKYLLDQRLATIPQHHWVG
KLLGFDFSVEYRSGATNVVADALSRRDTEEGEAMAISAPRFDLVDRLRHAQATDPALVAL
YAEVRSGARAAPWALVDGMITYDGRLYIPPTSPLLQEVVAAVHNDGHEGIHRTLHRLRRD
FHFPSMCRIVQAFVQACSTCQQYKSDHLRPAGLLQPLPVSSAVWADIGIDFIEVLPKVQG
KTVILSVVDRFSKYCHFIPLAHPYTAESVAQAFFADVVRLHGVPQSIVSDRDPVFTSAFW
QELMRLTGTKLFMSSAFHPQTDGQTEAANRVIVMYLRCFSGDRPRQWLRWLPWAEYIYNT
AYQSSLRDTPFQVVYGRDPPTIRSYEPGETRVAAVAQEMEDRAAFLDDVRYRLEQAQAAQ
KRIYDRHHRPVSFQVGDWAWLRLQQRAAASLPNAPKGKLKPRYVGPYQVLELINDVAVRL
HIGVLRKFVGAPPAAPPPLPPLLNGAAVPAPAKVIKARIARGVRQLLVEWQGEPVSAATW
EDLEDFRSRFPTFQLEDELDFEAGRDVMCGKTYARCRRARDVRRAAERAGRATQQPDGAT
SSG
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgacggagccctccgcagccgacctcctggcggccatcaaggccctcaccgaggacatg
gcgaccatgaaggccgatatggcctcgctgaagaaggagaagtcggagtcgtccgccggc
ggcggcggcggcggcaaccggcacgcggaaggtcagcacactgactacccgcccaagcac
aagaagtgggacttcccacgcttcgacggcaccaccgaccccatgctcttcctcaacaaa
tgcgaggcatatttccgccaacaccgcaccatggcggaggaacgcgtgtggcacgcttcg
tacaacctcgagggcgtcgcacagctgtggtataaccagctcgaggaagactctagcacg
cccacctgggcgcgcttcaaagagtacctgcacctgcggttcgggccaccgctcaggtcg
gcgccgctgttcgaactcgccgagtgccggcgcacgggcaccgtcgaagagtactccaac
cgttttaaggcgcttctacctcgcgcaggtcgcctggacgaggagcagcgtgtccagctc
tacaccggcggcctccttccgccgctcagtcatgtcgttcgcctccacaaccccgactgg
ctcgccgtggcgatgagtctcgcgtgccaggtcgagctgatggaggtcgagcggccgccg
ccacccgcgccacgtgctcctgcgcggggcattctgccggcgcccgcgccccgcgctgcc
ctgccgcccccaccgccaccactggccttgccggctccgctagcagccgcgcagccgggc
cgcggggacggccggcgtctctcgcccgaggagatggctgagcgtcgccgtctcggtttc
tgtttcaactgcaatgagaaatatactcgcggctataaccgtttttgcaggcgcattttc
ttcctggaaggcgtcgagattgacgacgccccggacgacgtggcagctgccgagcccgac
gccgaggctccctgtttctctctccaggctgtggctggggtccctgtggcgagtaccatg
cagctccgcgtgtccctcggcgccgcgaccctcgtcgctctcctcgactctggcagcacg
cacaacttcatctcggcggcagcagcccggcgttccggccttcccctgcgtcagcggcct
cgcctcactgccttggtcgcgaacggcgagcgcgtcacctgcgacggtgtcatccgcgac
gctcctctgctcatcgacggcgtcacgtttccgaccgacctcttcgtcatgccgctggcc
gggtacgacgtcgtcctggggacgcggtggctgggcgtgctggggcccatcgtctgggac
ctcggcagccggcgcgtgacgttccagcacctggggcgccctgtctcctggacaggcatc
gcctgccctgcggtgccgacactgggtgtcacatcagaggtcgggccgctcctcgacgcc
ctgctgcacgcgtacggggggctcttcgcagacccgacaggtctgccccccaaacgcgcg
cacgaccaccgcttcaccctgaagcccgacgcccagcccgtcgctgtccggccatatcgg
tacccagcagcgcacaaggacgagttggagcggcagtgcgccgctatgatcgagcagggt
atcgtccgacgcagcgactcgcccttctcatcgccggttctcctcgtcaagaagccggat
gggtcgtggcatttctgcgtcgactacagggcgttcaatgcgctcaccgtcaaagacgcc
ttcccgatcctggtggttgacgagctcctcgacgagctccacggcgccaagttcttcacc
aagctcgacctccggtccgggtatcaccaggtgcggatgaggccggaggatgtgcacaag
acggcgttccgcacccacgacggcctctacgagttcctggagatggtgttcgggctgtgc
aatgccccggcgacgttccaggccttgatgaatgacgtgctccggccgttcctccgccgc
ttcgtcgtggtattttttgatgatattctcatttacagcaggacatgggccaatcacctc
cgccaccttcgggccgtcctcgacgaactgcaacgccaccagctcttcgtcaagcgctcc
aaatgttcttttggcgcgccctctgtcgcctacctcggccatgtcatctccgcggcgggc
gtggccatggatccggccaaggtgcaggcgatccacgactggccggctccgcgatcggtg
ccggcagtccgcggctttctcagccttgcgggatactaccgcaagttcgtccacggctac
ggggcccttgccgcgccactatcggcgctcctcaagaaggagggcttctcctgggacgac
gcagccgcgtcggcgttcgcggccctcaaagacgctatcacgagggccaccatccaggcc
gtgcggcactggcggccgtacctctgggggcggagcttcaccgtcaagacagaccactac
agtctgaaatatctcctcgaccagcgcctcgccacgattccccagcaccattgggtcggc
aagctcttgggcttcgacttctcggtggagtaccgctccggcgccactaacgtcgtcgcc
gacgccctctctcgccgcgacaccgaagagggggaggccatggcgatctcggcgccccgc
tttgacctcgtcgaccgcctgcgccatgcccaggccaccgacccagccctggtcgccctc
tacgccgaggtccgttcgggcgcccgcgctgcaccatgggcgctggtggacggcatgatt
acctacgacggccgcctgtacatcccgcccacgtcgccgcttctccaggaggtcgtggcc
gccgtccacaacgatggtcacgagggcatccaccgcaccctccatcgcctccggcgcgat
ttccacttccccagcatgtgccgcatcgtgcaggcgttcgtgcaggcctgcagtacctgc
cagcagtacaagtccgaccacctcaggccagcgggactgctgcagccgctaccggtgtcg
tccgccgtctgggctgacatcggcatcgacttcatcgaggtgctgcccaaggtgcagggc
aagacggtcatcctctccgtggtcgaccgcttcagcaagtactgccacttcataccgctg
gcgcacccctacacagcggaatctgtcgcccaggcgttcttcgccgacgtcgtccgtcta
catggcgttccgcagtctatcgtctcggaccgcgacccggtgttcacgtccgcattctgg
caggagcttatgcggctcacggggacaaagctcttcatgtcgtcagccttccacccgcag
acggacggccagaccgaggccgccaaccgcgtcatcgtcatgtacctgcgctgtttctcc
ggggaccgtcctcgccagtggctccgatggctgccctgggcggagtacatatacaacacc
gcctaccagtcctctctccgcgacacgccgttccaggtggtctacggccgggatcccccg
accattcgctcgtacgagcctggcgagacccgagtggccgcggtggctcaggagatggag
gaccgcgccgccttccttgacgacgtccgctatcgcctagagcaggctcaggcggcgcag
aagcgtatctacgaccgacaccatcgcccggtgtccttccaggtcggcgactgggcctgg
ctgcgtctacagcagcgtgctgcggcgtccctccccaacgcgcccaaggggaagctcaag
cctcgctatgtcgggccgtatcaggtcctggagttgatcaatgacgtggctgtccgcctc
cacatcggtgtcctccggaagttcgtcggcgccccacctgcagcaccgcctccactgcct
cccctcctgaacggggctgctgttcctgctcccgccaaggtcatcaaggcacggatcgct
cggggtgtgcgtcagctgctcgtcgagtggcagggcgagccagtgtctgctgctacttgg
gaggatctggaggatttccgctctcggtttccgacctttcagctcgaggacgagctggac
ttcgaggcggggagagatgtcatgtgcggaaagacgtacgcaaggtgcaggcgcgcccgc
gacgtacgccgcgcggctgagcgcgcagggcgcgcgacccagcagcccgatggggcaact
tccagtggctag
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