Sorghum bicolor (sorghum): 8054863
Help
Entry
8054863 CDS
T01086
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8054863
03036 Chromosome and associated proteins [BR:
sbi03036
]
8054863
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8054863
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
Helicases
8054863
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
8054863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
P-loop_SecA
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
8054863
NCBI-ProteinID:
XP_002460541
UniProt:
C5X615
LinkDB
All DBs
Position
2:65219006..65223367
Genome browser
AA seq
711 aa
AA seq
DB search
MSPALASAVEPMAVDDSASKKAKRKQLKAAAAAAEAEAEAASAKKKEKKEKKRKAKEPSP
PPPSASSSDEEEKSSTSSEETAPAAKKAKKEKTKKNVEVSSSASDDDGEITASSDEDPAD
PNALTNFRISEPLRQSLRSKGIKALFPIQATTFDLVLDGNDLVGRARTGQGKTLAFVLPI
LESLVNGAHKASRRTEHGRTPSVIVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPY
RPQEMALRRGVDIVVGTPGRVKDFIVKGTLNLKNLKFRVLDEADEMLNMGFVDDVELILG
KVEDATKVQTLLFSATLPDWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKA
ARAQVIPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRG
GKFQVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRY
KYSVNRLERESGVKFEHISAPQPTDVAQSAGSEAADAISSVSDSVIPVFRQQAEQLLSSS
SLSAADLLAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPE
EKLADVKGATLTADGTGVVFDVPAADVEDYIQASENAAQVTIDEVKQLPPLQEKEQSRGN
SGGGRFGRGGGGRFSGGGRGGGFGGGGRGRGGGGRGFSGRGGGGNRFNRRN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcccttgcctctgccgtggagcccatggccgtcgacgactccgcctccaag
aaggccaagcgcaagcagctcaaggccgccgccgccgccgcggaggcagaggcggaggcc
gcttcggctaagaagaaagagaagaaggagaagaagcgcaaggcgaaggagccgtcccct
ccgcccccgtcggcctcgtcctctgacgaggaggagaagagcagcaccagctccgaggag
acggcccccgccgcgaagaaagcgaagaaggagaagacgaagaagaatgtcgaggtctcg
tcttcagcctcggacgacgacggcgagatcacggccagcagcgacgaggaccccgcggac
ccgaacgcgctgacgaacttcaggatatcggagccgctgaggcagagcctcaggtccaag
gggatcaaggcgctgttccccatccaggccaccactttcgacctcgtactcgacggcaac
gacttggttggccgagcgcgcaccggtcaggggaaaactttggcttttgtcttgcccata
ttggagtctttggttaacggggcacacaaggcatctagacgaactgaacatggcaggacc
ccaagtgttattgttctgctacccacaagagagctggccaatcaggtgcatgccgacttt
gagttttatggtgcaacatttgggctttccgcatgttgtgtgtatgggggttctccttat
cgtcctcaagaaatggctttgagaaggggtgtggacattgttgttggaactcctggtcgt
gtcaaggatttcattgtaaaaggaactctcaatttgaaaaacttgaaattccgtgtcctt
gatgaagctgatgagatgcttaacatgggttttgttgatgatgtcgagctcattcttggc
aaagtagaagatgctaccaaagtacagacacttctgttcagtgccactctgccagattgg
gtgaataagctctctatgaggtttctgaaagttgacaggaaaacggttgatcttgtcggt
aatgagaaactgaaggccagtgcatctgttaagcaccttgctcttccttgtaacaaggca
gcaagggcacaagttattccagacattatccgatgctatagccatggaggccgaaccatt
atcttcactgagacaaaggattctgcatcagagctttctggtttgattcctggatcccgt
gccttgcatggagatgtcgtgcaagctcagcgtgaagtcattcttgctggattccgtggc
gggaagttccaagttttggttgctacaaatgtggcggctcgtggtctggatattaatgat
gtgcagcttatcattcagtgtgaacctccccgtgacgttgaagcttacatacaccggtca
ggtcggacagggagagcaggtaatactggtgttgctgtcatgctttatgagcccagatat
aaatacagtgtcaacagactagaaagggagtctggggttaagtttgagcatatctctgcg
ccacagcctactgatgtagcacaatctgctggcagtgaagctgcagatgccatttcgagt
gtgtcagatagtgttattcctgtcttcaggcagcaagcagagcagttgctaagctcttcc
agcctgtctgcagctgacttgcttgccaaggcacttgcaaaggcagttggttacacggac
ataaagaaaagatcattgttatcttccatggaggattacactacattacatcttcaaact
ggcagaccgatgtggtcacctgggtttgcttttactatattgaaaaggttcatgccagaa
gagaaacttgcagatgtaaagggtgcaaccctcacggctgatggaacaggtgttgtattt
gatgttcctgcagcagatgttgaagattacattcaagcttcggagaatgctgcacaggtg
acaattgatgaagtcaagcaactgccacccttgcaagagaaggagcagtcaagaggcaac
tctggcggaggaagatttggccgtggaggtggtgggagattctctggtggtggccgtgga
ggcggcttcggtggtggtggcagaggcagaggtggtggcggcagagggttttctgggagg
ggaggcggcggcaacagatttaacaggaggaattag
DBGET
integrated database retrieval system
