Sorghum bicolor (sorghum): 8055145
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Entry
8055145 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8055145
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8055145
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8055145
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8055145
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8055145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
8055145
NCBI-ProteinID:
XP_021319640
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All DBs
Position
1:complement(56393010..56403040)
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AA seq
902 aa
AA seq
DB search
MADADAAETVGAAYMPVAPPLVLPDAAVPPPMPAAVTVVTLPPVAADAMEAAVAAMSVAL
LPPPPEQMSQSVMGGGEDSEEECLQGEFHESQSVMGGGEDSEEECLQGEFHEAVESIEVL
LSSLADNQKPYDMMGYIITEKNECEQDRESLPEKKLYFQKKLPEVTVQALGHLLEEEQPA
MAISDNSKESDKQIPPPSPCPSDEQQKPKDNGDLSDDSPNSSDHSDHSDGEHHYDIPIHS
LYKYDPFRFMHGRERRNCGYSCSFSDRRNHWNDGYPFMYGFRNLWNPMRSCWSWPSPEPD
CEKESYTVGAGLSNPHLWTCFLNCILQCMVHTVPLVLKLRKTDHPDPCPRASIGFCCYCS
LKQHVNESIRLSGSSFYPEIFINRLKSISSDFKSGVQQDAQEFLRCLLDKLDEDSIAPRS
SEESSTTKEGSVVKEIFRGCLKSQLRCPECDRCSDKSEPFLDLSLDLNMVETLMDALQSF
TNTELIKDFMCDGCKSRVSMEKHFKIEQAPEVLVIHLKRFTNSESKIWDKVKYPLELDIN
SFMSSSDDTLQKYDLYGVVEHLGAYGSGHYVCYIRSSEADWYKFNDDKVYQCSVDSALEN
AAYLLFYVKQGSSPWFSTLLEKEDKCPLDGSVSLEEQGKVALVNKEEEATSCHGQRNGPT
LIDKEEEATSSHGQGNGPTLPDLSEQLQRNGNGNTLSDASDELEEGFRLGETSTGTQGPS
CLIGSDKNGHADGCWEPSGKMKDVSPRGSLNRKEMKPSTCGSLEVDHAVTHGGSPRKNEN
NCHLLQLSHKCKDNCDSLEVDHAVTQGGSPRKNENYCHLLQLPHKRKDNCCHRNLSLQGG
GEEGRGRGGGQIKKRKSAAGVESKKRKSADGGESKALRKRQKTKHRTVARQFALCWWKWQ
VQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggatgccgccgagaccgtcggcgccgcgtatatgccggtcgcgccgccg
ctggttttgccggacgccgcagtgcctccgccgatgccggcggcagtgaccgtcgtcacc
ctgccgcctgtagccgctgacgccatggaggccgccgtcgcggctatgtcggtcgctctg
cttcctccaccgcccgagcaaatgagtcagtctgtgatgggtggtggagaggactcagag
gaagagtgtttgcaaggtgaattccatgagagtcagtctgtgatgggtggtggagaggac
tcagaggaagagtgtttgcaaggtgaattccatgaggctgttgaaagcattgaggttctg
ctatcttctcttgctgataatcagaagccctatgacatgatgggctatatcatcacagag
aagaatgaatgtgagcaggacagagaatctcttccagagaagaagctttactttcagaag
aagctgcctgaggtgaccgttcaggctttggggcatttactagaagaggagcagccagcc
atggccatttctgataacagcaaggaaagtgacaaacaaataccacctccatcaccatgt
ccttcagacgaacagcaaaaacctaaggacaatggtgatctttcagacgattcccctaac
tctagtgaccatagtgatcatagtgatggtgaacatcattacgacattccaatacatagt
ctgtacaagtatgacccgtttcgatttatgcatggaagagagagaagaaattgtggatat
tcatgtagttttagtgacagaagaaaccactggaatgatggctatccgtttatgtatggc
tttcgaaacctatggaatcccatgaggagttgttggtcttggccctctccagaaccagac
tgtgagaaggaaagctacactgtgggtgctgggctatccaatcctcatttgtggacatgt
tttcttaattgcatactccaatgtatggttcacacagttcctcttgtattgaagcttcgg
aaaactgatcatccagatccatgccctcgtgcttcaattggattctgttgttactgctcc
ctaaaacagcatgtcaatgaatctatcaggctctctggaagttctttctaccctgagatt
ttcattaatcgcctgaaatcaatttcgtcagattttaagagtggagtacaacaagatgcg
caggagttcctccgctgtttgcttgataaattggatgaggactccattgctcccaggtcc
tctgaagaatcctctacgactaaagaaggtagtgtggtaaaagaaatattcagagggtgc
ttgaaaagccagttgcgatgtccagagtgcgaccgttgctcagataaatctgagcctttt
cttgatctaagcttggatttgaacatggtggagactctaatggatgctttgcaatccttt
acaaatactgagttaatcaaagacttcatgtgtgatggatgcaaatctcgtgtgagcatg
gaaaaacacttcaagatagagcaggcgcctgaagtgcttgtaatccatctcaagcgattc
actaattctgagtctaagatttgggacaaggtcaagtatccgttggagctggatataaac
tccttcatgagttcttcggatgatacactgcagaagtatgatttgtatggagttgtagaa
cacctcggtgcatatggcagtggtcactatgtttgttatatccggtcatctgaagctgat
tggtacaaatttaacgatgacaaggtctaccaatgttccgtggatagcgctttggaaaat
gcagcatatcttcttttctatgtgaagcaaggttcatccccgtggttctctaccttactt
gagaaagaagacaagtgtccactggatggttcagtaagcttggaagaacaaggcaaagtt
gctctcgtcaacaaagaagaggaggcgacatcttgtcatgggcaaagaaatggacctact
ctcatcgacaaagaagaggaggcgacatcttctcatgggcaaggaaatggacctactttg
ccagacctatctgaacagttacaaaggaatggaaatggcaataccttgtcggatgcatca
gatgaactggaagaaggtttcaggctgggtgaaacatcaacaggaacacaaggacctagc
tgtcttattggatcagacaagaatggccatgccgatgggtgttgggagccgtcaggtaag
atgaaggatgtcagcccaagggggtcactgaacaggaaggaaatgaagccaagcacatgt
ggatctttagaagttgatcatgctgttacacatggtggctctcctcgaaagaatgagaat
aattgccacttgctccaactttcacataaatgcaaagataactgtgactctttagaagtt
gatcatgcagttacacagggaggctctcctcgaaagaatgagaactattgccacttactc
caacttccacacaaacgcaaagacaactgttgtcacaggaatctctccttgcaaggtggt
ggggaagaaggcagaggaagaggagggggccagattaagaagcggaagtctgccgctggt
gttgagagtaagaagcggaagtctgctgatggtggcgagtcaaaggcattaaggaagcgc
cagaagacgaagcaccgcaccgtagcaaggcagttcgctctctgttggtggaagtggcag
gtacagtag
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