Sorghum bicolor (sorghum): 8055484
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Entry
8055484 CDS
T01086
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8055484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8055484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8055484
Membrane trafficking [BR:
sbi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
8055484
Exosome [BR:
sbi04147
]
Exosomal proteins
Proteins found in most exosomes
8055484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
8055484
NCBI-ProteinID:
XP_021302257
LinkDB
All DBs
Position
8:324046..334846
Genome browser
AA seq
1710 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVICAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSEI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREY
TSKVDDLVKDKIESQKEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPPMGG
MGMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggcgctcacgctcaccagcctgggc
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacgccccatcaccgccgactccgcactcatgaaccccaacaccaggatcctc
gcactcaaagcccaaatacctggaacaacacaggatcaccttcaaatatttaacattgag
gctaagactaagatcaagtctcaccagatgccagagcaggttgtattttggaaatggatc
actcccaaattgttgggtttagtgacacaaacatctgtttaccactggtcgattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatttggcaaacaatcagatcatc
aactatcgatgcgacccagcggaaaagtggcttgtacttattggaattgcacctggagcc
ccagagaggccacaactggtgaagggaaatatgcagcttttttctgttgatcaacaacgt
agccaggcccttgaagcccatgcagcatcttttgcaacatttaaggttgttggtaatgag
aatccatcaacccttatttgtttcgcctcaaagacaactaatgctggacaaatcacttca
aagctgcatgttattgaactgggtgcacagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacaaagcttggccttttgtttgtatatgactta
gaaactgccgcggcagtttacagaaatagaatcagtccagaccctatattcttgacggca
gaatcttcttctactggtggattttatgccatcaacagaagagggcaggttttacatgct
acagttaatgacgcaactgttgtaccttttgtcagtggccaattaaacaaccttgagctt
gctgtgaatctagccaagagagctaaccttcctggtgctgagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacaaaatacaaggaagcagctgagctggctgcggaatct
ccccagggtctcctgaggacgcctgagaccgtggcaaaatttcagagcgtgcctgtgcaa
gctgggcaaacacccccactcttgcagtactttggcacattgctaactcgagggaagctc
aatgcctttgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaatctt
ctcgaaaattggctggcagaagacaagctggagtgtagtgaagaactaggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatatacataaaggctagggcaacacctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatactgatatactcaaagcag
gttgggtacacgccagattatctcttcctcctccagaccatcttgcgcacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggagggaggctgcccagtagattat
aatacaataactgaccttttccttcagagaaatatgatacgggaggcaacagcttttctg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttagtgacttacccgaatgttgctgatgccattcttgctaatggtatgttcagt
cattatgaccgccctcgtattgctcagctgtgtgaaaaggctggtttgtacttgcgagcc
ctccagcattactcagagttgcctgatatcaagcgtgtcattgtaaatacccatgccatt
gagccacaggcacttgttgagttctttggcaccttgtcaagagagtgggctttggagtgc
atgaaagacctcctactggttaacctgaggggaaatcttcagattgttgtgcaggctgca
aaagaatactctgaacagctaggggttgacgcttgcattaaattatttgagcaattcaaa
tcttatgagggcctttactttttcttgggatcctatctgagctccagcgaggacccagat
atccatttcaagtacatagaagcagctgcaaggactggacagatcaaagaagttgaacgt
gtaaccagagagtcaaacttctatgatgctgagaagacaaagaactttttgatggaagca
aaactacctgatgcccgtccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtatacaaacaacatgcttcgatatatcgaaggctatgttcagaag
gtgaatcctgggaatgctccattggtagtggggcaactacttgacgatgagtgccctgaa
gattttatcaagggtttgattctctctgttcgttctctccttcctgttgagccactggtt
gatgaatgtgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agtgaaggtagccaagatgtgcatgtccataatgctcttggcaaaatcatcattgacagc
aacaacaatcctgagcatttccttactaccaatccattttacgactctcgtgttgtgggt
aaatattgtgaaaagcgggatcctacacttgctgttgttgcttacagacgtgggcagtgt
gatgatgaacttattaatgtcactaacaaaaactctttattcaagctacaagctaggtat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcaactcattgaccaagtggtttcgactgcattgcctgagagcaagagccctgag
caagtttctgcggctgttaaggctttcatgactgctgacctgcctcatgaacttattgag
cttcttgaaaagattgttcttcagaattctgctttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgctatcaaggcagatccatccagagtcatggactatatcaacaga
cttgataactttgatgggcctgctgttggagaagttgctgttgaagcacagctgtatgag
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccggagcatagaaagagctgaggaatttgctttccgtgttgaagaagatgct
gtgtggagccaggttgccaaagcccagttacgtgaaggtctggtcagtgaagcaattgag
tccttcattcgcgcagatgatgctgcacatttccttgatgttatctgtgctgccgaggaa
gctaatgtgtacgatgatttagtaaagtaccttctgatggtaaggcaaaaggcacgggaa
cccaaagttgatggagaactcatctttgcatatgctaagattgacaggctcagtgaaatt
gaggaattcattcttatgccaaatgttgccaaccttcaaaatgttggtgaccgcctgtat
gatgaagaactatatgaagctgcaaagatcatctatgctttcatctcaaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgccaaaacatggaaggaggtctgctttgcttgtgttgatgccgaggagttc
cgtcttgcacaaatatgtggtctcaatattattgttcaggttgatgacttggaagaagtc
agtgaatactaccagaatagaggatgtttcaatgagcttattgctctcatggagagtggt
cttggacttgaacgtgcacacatgggcatcttcacagaattgggagttctatatgctaga
taccgccctgagaagcttatggagcacatcaaacttttctccacccgtctcaatattcct
aagcttatccgggcttgtgatgaacagcagcactggaaagaacttacctacctgtacata
cagtatgacgaatttgacaatgctgccaccactattatgaaccactctccagatgcatgg
gatcatatgcagttcaaggatgtctgcgttaaagttgcaaatgtcgagctgtattacaag
gcagttcacttctatttgcaagagcatcctgatctcatcaatgatatgctaaacgtgctt
gcacttcggttagatcatacccgagttgtagacataatgcgcaaggctggtcagttgcat
ctagtgaaaccgtatatggttgcagttcagagtaacaatgtctctgctgtgaatgaagcc
ttgaatgagctttatgttgaagaggaagactatgagagactccgtgaatcagttgacatg
catgacaactttgaccagataggtcttgcccagaagcttgagaagcatgaattgctggag
atgcggaggattgccgcctacatttacaagaaggctggcaggtggaagcaatccattgct
ctatccaagaaagacaacatgtacaaggattgcatggagacatgctcacaatctggtgac
cgtgaactgtcagaggacttgcttgtctatttcattgagcagggtaagaaagaatgcttt
gcttcctgcctcttcatttgctacgacttgatccggccagatgtcgctcttgagcttgca
tggatgaacaacatgttggactttgccttcccatacctgttgcagttcatccgtgaatac
actagcaaggttgatgatttagtgaaggacaaaattgagtcgcagaaggaagaaagagcc
aaagagaaggaggagaaagatcttgtggctcagcagaacatgtacgcccaactgcttcct
cttgctttgcccgctccgccaatgcctggcatgggcggccctccacctccgatgggtgga
atgggcatgcctccaatgggtggaatgggtatgccgccaatgggccctggtccgatgcca
gcatttgggatgccgccaatgggaagctactga
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integrated database retrieval system