KEGG   Sorghum bicolor (sorghum): 8055484
Entry
8055484           CDS       T01086                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8055484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8055484
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8055484
Membrane trafficking [BR:sbi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    8055484
Exosome [BR:sbi04147]
 Exosomal proteins
  Proteins found in most exosomes
   8055484
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 8055484
NCBI-ProteinID: XP_021302257
LinkDB
Position
8:324046..334846
AA seq 1710 aa
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVICAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSEI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREY
TSKVDDLVKDKIESQKEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPPMGG
MGMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq 5133 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggcgctcacgctcaccagcctgggc
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacgccccatcaccgccgactccgcactcatgaaccccaacaccaggatcctc
gcactcaaagcccaaatacctggaacaacacaggatcaccttcaaatatttaacattgag
gctaagactaagatcaagtctcaccagatgccagagcaggttgtattttggaaatggatc
actcccaaattgttgggtttagtgacacaaacatctgtttaccactggtcgattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatttggcaaacaatcagatcatc
aactatcgatgcgacccagcggaaaagtggcttgtacttattggaattgcacctggagcc
ccagagaggccacaactggtgaagggaaatatgcagcttttttctgttgatcaacaacgt
agccaggcccttgaagcccatgcagcatcttttgcaacatttaaggttgttggtaatgag
aatccatcaacccttatttgtttcgcctcaaagacaactaatgctggacaaatcacttca
aagctgcatgttattgaactgggtgcacagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacaaagcttggccttttgtttgtatatgactta
gaaactgccgcggcagtttacagaaatagaatcagtccagaccctatattcttgacggca
gaatcttcttctactggtggattttatgccatcaacagaagagggcaggttttacatgct
acagttaatgacgcaactgttgtaccttttgtcagtggccaattaaacaaccttgagctt
gctgtgaatctagccaagagagctaaccttcctggtgctgagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacaaaatacaaggaagcagctgagctggctgcggaatct
ccccagggtctcctgaggacgcctgagaccgtggcaaaatttcagagcgtgcctgtgcaa
gctgggcaaacacccccactcttgcagtactttggcacattgctaactcgagggaagctc
aatgcctttgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaatctt
ctcgaaaattggctggcagaagacaagctggagtgtagtgaagaactaggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatatacataaaggctagggcaacacctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatactgatatactcaaagcag
gttgggtacacgccagattatctcttcctcctccagaccatcttgcgcacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggagggaggctgcccagtagattat
aatacaataactgaccttttccttcagagaaatatgatacgggaggcaacagcttttctg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttagtgacttacccgaatgttgctgatgccattcttgctaatggtatgttcagt
cattatgaccgccctcgtattgctcagctgtgtgaaaaggctggtttgtacttgcgagcc
ctccagcattactcagagttgcctgatatcaagcgtgtcattgtaaatacccatgccatt
gagccacaggcacttgttgagttctttggcaccttgtcaagagagtgggctttggagtgc
atgaaagacctcctactggttaacctgaggggaaatcttcagattgttgtgcaggctgca
aaagaatactctgaacagctaggggttgacgcttgcattaaattatttgagcaattcaaa
tcttatgagggcctttactttttcttgggatcctatctgagctccagcgaggacccagat
atccatttcaagtacatagaagcagctgcaaggactggacagatcaaagaagttgaacgt
gtaaccagagagtcaaacttctatgatgctgagaagacaaagaactttttgatggaagca
aaactacctgatgcccgtccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtatacaaacaacatgcttcgatatatcgaaggctatgttcagaag
gtgaatcctgggaatgctccattggtagtggggcaactacttgacgatgagtgccctgaa
gattttatcaagggtttgattctctctgttcgttctctccttcctgttgagccactggtt
gatgaatgtgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agtgaaggtagccaagatgtgcatgtccataatgctcttggcaaaatcatcattgacagc
aacaacaatcctgagcatttccttactaccaatccattttacgactctcgtgttgtgggt
aaatattgtgaaaagcgggatcctacacttgctgttgttgcttacagacgtgggcagtgt
gatgatgaacttattaatgtcactaacaaaaactctttattcaagctacaagctaggtat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcaactcattgaccaagtggtttcgactgcattgcctgagagcaagagccctgag
caagtttctgcggctgttaaggctttcatgactgctgacctgcctcatgaacttattgag
cttcttgaaaagattgttcttcagaattctgctttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgctatcaaggcagatccatccagagtcatggactatatcaacaga
cttgataactttgatgggcctgctgttggagaagttgctgttgaagcacagctgtatgag
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccggagcatagaaagagctgaggaatttgctttccgtgttgaagaagatgct
gtgtggagccaggttgccaaagcccagttacgtgaaggtctggtcagtgaagcaattgag
tccttcattcgcgcagatgatgctgcacatttccttgatgttatctgtgctgccgaggaa
gctaatgtgtacgatgatttagtaaagtaccttctgatggtaaggcaaaaggcacgggaa
cccaaagttgatggagaactcatctttgcatatgctaagattgacaggctcagtgaaatt
gaggaattcattcttatgccaaatgttgccaaccttcaaaatgttggtgaccgcctgtat
gatgaagaactatatgaagctgcaaagatcatctatgctttcatctcaaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgccaaaacatggaaggaggtctgctttgcttgtgttgatgccgaggagttc
cgtcttgcacaaatatgtggtctcaatattattgttcaggttgatgacttggaagaagtc
agtgaatactaccagaatagaggatgtttcaatgagcttattgctctcatggagagtggt
cttggacttgaacgtgcacacatgggcatcttcacagaattgggagttctatatgctaga
taccgccctgagaagcttatggagcacatcaaacttttctccacccgtctcaatattcct
aagcttatccgggcttgtgatgaacagcagcactggaaagaacttacctacctgtacata
cagtatgacgaatttgacaatgctgccaccactattatgaaccactctccagatgcatgg
gatcatatgcagttcaaggatgtctgcgttaaagttgcaaatgtcgagctgtattacaag
gcagttcacttctatttgcaagagcatcctgatctcatcaatgatatgctaaacgtgctt
gcacttcggttagatcatacccgagttgtagacataatgcgcaaggctggtcagttgcat
ctagtgaaaccgtatatggttgcagttcagagtaacaatgtctctgctgtgaatgaagcc
ttgaatgagctttatgttgaagaggaagactatgagagactccgtgaatcagttgacatg
catgacaactttgaccagataggtcttgcccagaagcttgagaagcatgaattgctggag
atgcggaggattgccgcctacatttacaagaaggctggcaggtggaagcaatccattgct
ctatccaagaaagacaacatgtacaaggattgcatggagacatgctcacaatctggtgac
cgtgaactgtcagaggacttgcttgtctatttcattgagcagggtaagaaagaatgcttt
gcttcctgcctcttcatttgctacgacttgatccggccagatgtcgctcttgagcttgca
tggatgaacaacatgttggactttgccttcccatacctgttgcagttcatccgtgaatac
actagcaaggttgatgatttagtgaaggacaaaattgagtcgcagaaggaagaaagagcc
aaagagaaggaggagaaagatcttgtggctcagcagaacatgtacgcccaactgcttcct
cttgctttgcccgctccgccaatgcctggcatgggcggccctccacctccgatgggtgga
atgggcatgcctccaatgggtggaatgggtatgccgccaatgggccctggtccgatgcca
gcatttgggatgccgccaatgggaagctactga

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